Sceloporus undulatus (fence lizard): 121931903
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Entry
121931903 CDS
T07740
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121931903
Ion channels [BR:
sund04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121931903
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
FUT8_N_cat
IQ
DUF3138
FraC
New_glue
Motif
Other DBs
NCBI-GeneID:
121931903
NCBI-ProteinID:
XP_042325977
LinkDB
All DBs
Position
1:211934316..212102148
Genome browser
AA seq
2006 aa
AA seq
DB search
MEQPVLVPPGPDSFHYFTRESLAAIEQRIAAEKAKQSKQDRKDDDENGPKPSSDLEAGKS
LPFIYGDIPPGMVATPLEDLDPFYLNKKTFIVLNRGKAIFRFSATPALYIISPFSLLRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPEWTKNVEYTFTGIYTFESLIKIIARGFCI
DDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLYWNPGNSTDSNDTYLFNITLGE
NGTFNSTPFDWNEYIQDESNFYFLEGQNDALLCGNSSDAGQCPEGYVCVKAGRNPNYGYT
SFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVA
MAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEAVQAAATAAATASAESKEPSAGGGIGG
LSESSSEISKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHRSESEDSIRRKGCRFSI
EGNRLTLERKHSSPHQSLLSMRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFADDEHSTF
EDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVVSLVGGPS
VPTSPVGQLLPEVIIDKPATDDNATTTETEMKKRRSSSFHVSMDFLEDPTLRERAMSIAS
IITNTMEELEESRQKCPPCWYKFANIFLIWDCCPCWLKVKHYVNIVVMDPFVDLAITICI
VLNTLFMAMEHYPMSEEFASVLNVGNLVFTGIFTGEMFFKLVAMDPYYYFQEGWNIFDGF
IVSLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLA
IIVFIFAVVGMQLFGKSYKECVCKIAKDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWD
CMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVAR
IDKGVAYMKRKLHEFIQNSFVKKQKALDEIKPLEELNKNSCISNHTVEIGKDLDYFRDGN
GTTSGIGTGSSVEKYVVDESDYMSFINNPSLTVTVPIALGESDFENLNTEEFSSESDLEE
SKEKLNSSSSSEGSTVDIGVPAEEQPEAEPEEALEPEACFTEGCVQRFKCCQVSVEDGRG
KQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTY
IFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRAL
RPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTT
GDIFPINEVNNYSQCEELIQANETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAA
VDSRNVLQQPVYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPGNKYQGMVFDFVTRQVFDISIMILICLNMITMMVE
TDDQSVQTEEVLYRINLIFIVLFSGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFL
AEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFMITTSAGWDGLLAPILNSGPPDC
DPKKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVATEESAEPLS
EDDFEMFYEVWEKFDPDATQFMEFEKLSEFAAALEPPLHLPKPNKVQLIAMDLPMVSGDR
IHCLDILFAFTKRVLGESGEMDALRIQMEERFMQSNPSKASYEPITTTLKRKQEELSAVI
IQRAYRRYRLKQTVQQASFVYKNKIEGGAGLRIKDEILIDKINENSYTEKTDLTMSTAIC
PPSYDRVTKPIEEKHEKEGKDVQKKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccagtgcttgtaccaccaggacctgacagctttcactacttcaccagagag
tctcttgcagctattgaacaacgcattgctgcagaaaaggcaaagcagtccaaacaagat
cgtaaagacgacgacgaaaatggcccaaagccaagtagtgacttggaggctggcaaatca
ctgccatttatttatggagacatacctccgggaatggtggctactcccttggaagacctg
gacccattttatcttaataaaaaaacttttatagtattgaacagaggaaaagcaattttc
cgattcagtgccacccctgccctatacataataagtcctttcagccttcttagaaaaata
gctattaagattttggtacattcattattcagcatgctcattatgtgcactattttgacc
aactgtgtatttatgaccctaagtaaccctcctgaatggacaaagaatgtagagtataca
ttcacaggaatatatacatttgaatcgcttataaaaataattgcaaggggcttttgtata
gatgatttcacctttctccgggatccctggaactggctagatttcactgtcattacattt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagtt
ctccgggcattgaaaacaatatcagtcatcccaggcctgaagaccattgtgggagccctc
attcagtctgtgaagaagctgtcagatgtaatgattctgactgtattttgtctgagtgta
tttgctctaatagggctccagctgttcatgggcaacttgaggcacaaatgcttgtactgg
aatccaggcaattctacagattcaaatgatacttacctctttaatatcactcttggagaa
aatggtacatttaacagtacaccctttgactggaacgaatacatacaggatgaaagcaat
ttttactttctggaaggacaaaatgatgctttgctttgtgggaacagttctgatgcaggt
caatgtccagaaggatatgtgtgtgtgaaagctggtagaaatcccaactatggctataca
agttttgacacctttagctgggccttcctgtctctttttcgattgatgactcaggacttc
tgggaaaatctttatcagctgacgctacgtgctgctggcaaaacatacatgatctttttt
gtcctggtgatcttcttgggctctttctacctgatcaacttgatcctggctgttgttgcc
atggcttatgaagagcagaatcaagccacaatggaagaagcagagcagaaagaggcagag
tttcagcagatgcttgagcagctgaaaaaacaacaagaagcagttcaggcagcggcgaca
gctgcagcaacagcatcagctgaatcaaaagaaccaagtgccgggggaggaataggtgga
ctttctgaaagttcttccgaaatatcaaagctgagttcaaagagtgccaaagagcggaga
aacagaaggaagaaaagaaaacagaaagagcaatccggaggagaggaaaaagatgaagat
gaatttcacagatctgaatcagaagatagcatcaggagaaaaggttgccgattctctatt
gaagggaataggttaacattagaacggaagcactcttctccccatcagtctttgctgagc
atgcgtggctccctgttttccccaaggcgcaacagcagaacaagccttttcagcttcaga
ggtagagcaaaggatataggatcagagaatgactttgctgatgatgaacacagcacattt
gaagataatgatagcagaagagattccctttttgtgccgcgcagacatggtgaacggcgc
aacagtaacattagtcaggccagtaggtcatccaggatgctggcagtgtttccagtgaat
gggaagatgcacagcactgtggattgcaatggggtggtttccttggttggtggaccatct
gttcctacatcgcctgttggacagcttctgccagaggtgataatagataaaccagctact
gatgacaatgccacaaccacagaaacagaaatgaaaaaaaggagatccagttcttttcac
gtttctatggattttttggaagaccctactctaagagaaagagccatgagtatagctagt
ataatcacaaacaccatggaagaacttgaagagtcccgacagaagtgcccaccctgttgg
tataaatttgcaaacattttcttgatctgggactgctgtccatgttggttgaaagtaaag
cattatgttaacattgttgtgatggatccatttgttgaccttgcaattacaatttgcatt
gttttaaacacacttttcatggcaatggagcattacccaatgtcagaagaatttgcaagt
gtgcttaatgttggaaatctggttttcactggaatcttcacaggtgaaatgtttttcaaa
ctagtagccatggatccttattattacttccaagaaggctggaacatttttgatggcttt
attgtctctctgagtttggttgaacttggactagctgatgtagaaggactatcagttctc
cggtctttcagactgctgcgagttttcaaattagcaaaatcctggccaacattaaatatg
ctgataaagattattggtaactcggtgggtgctttgggaaatttgactttggttctggcc
atcattgttttcatttttgccgtggttgggatgcagctgtttggtaaaagctacaaggaa
tgtgtctgcaagattgcaaaagactgtgagctcccacgatggcacatgaatgactttttc
cactctttcttgatcgtgttccgagtactttgcggagaatggatagaaaccatgtgggac
tgtatggaggttgcaggtcaagctatgtgccttaccgtcttcatgatggttatggtgatt
ggaaatttagtggtgctgaatctatttttggccttgctactgagctcttttagtgcagac
aaccttgctgccacagatgatgacaacgaaatgaacaatctccagattgctgtggcaaga
atagacaaaggagttgcctatatgaaaagaaagctccatgaattcatacagaattccttt
gttaaaaagcaaaaagctttagatgagatcaaacctcttgaggagctaaataagaacagc
tgcatttctaaccatactgtggaaattggcaaagatctggattattttagggatgggaat
gggactacaagtggcattggaacaggtagtagcgtggaaaaatatgttgttgatgaaagt
gattatatgtcattcataaataatccaagcttgactgtgactgtgccaattgctcttgga
gaatcggattttgaaaatttaaatacagaggaatttagcagtgaatcagatttggaagag
agcaaagagaagctaaattcctctagctcatctgaaggaagcactgtggatattggagtt
ccagcagaagagcaaccagaagcagaacctgaggaagcacttgaacctgaagcttgtttt
acagaaggctgtgttcagagattcaagtgctgtcaggttagtgtggaagatgggagagga
aaacaatggtggaatcttagaaaaacttgcttccgaatagttgagcacaactggtttgaa
accttcattgtctttatgattcttcttagtagtggtgctctggcatttgaagacatatac
attgagcaaagaaaaactatcaagaccatgctggaatatgctgacaaggttttcacctac
atcttcattcttgagatgcttctgaaatgggtggcatatggatatcaaacgtacttcacc
aatgcctggtgttggctggatttcctgatcgttgatgtgtcattggttagcttaactgca
aatgccttgggttattcagaacttggtgccattaagtctcttcggacactgagagctttg
aggcctttgagagccttgtcaagatttgaaggcatgagggtggttgtgaatgcccttctt
ggagcaattccatccattatgaacgtgcttcttgtttgtcttatattctggctaattttc
agcatcatgggagtaaatctgtttgctggcaaattctaccactgtattaacaccacaact
ggtgacattttcccaatcaatgaagttaacaattattctcagtgtgaagaactcatacaa
gcaaatgaaacagccagatggaaaaacgtgaaagtgaactttgataatgtaggatttggg
tatctttctttgctgcaagtagctacatttaaaggatggatggatattatgtatgcagca
gttgattcaagaaatgtacttcagcagcccgtctatgaggacaacctttacatgtatctt
tactttgttattttcatcatctttgggtcattcttcactttgaatctttttattggtgtc
atcattgataacttcaatcaacaaaaaaagaagtttggaggtcaagacatctttatgaca
gaagaacagaaaaagtactacaatgcaatgaaaaagttgggatctaaaaagcctcagaaa
cctataccgagacctgggaacaaataccaaggaatggtctttgattttgtaacaagacaa
gtatttgacatcagtattatgatacttatctgccttaatatgatcactatgatggtagaa
acagatgatcaaagtgtacaaacagaagaagttctatatcgtatcaacctgatattcatt
gtccttttctctggtgaatgtgttctcaagctaatttcactacgctactattatttcact
attggatggaacatttttgattttgtggttgtcatcctctccattgtaggtatgttcctg
gcggagatcattgagaaatactttgtgtcccccaccttgttccgagtgatccgacttgcc
aggataggccggatcctgcgtctaatcaagggtgctaaagggatccgcactctgcttttt
gccttgatgatgtctcttcctgccttgtttaacattggcctcctccttttcctcgtcatg
ttcatctatgctatatttggtatgtccaactttgcctacgtgaagagagaagttggaatc
gatgacatgttcaactttgaaacatttggcaacagcatgatctgcctttttatgattacc
acctctgcaggctgggatggcttgctggcacccattctcaacagtgggcctccagattgt
gaccctaaaaaagaccatccaggcagctcagtcaaaggagactgcggtaatccttctgtt
gggattttcttctttgtcagttacatcatcatatcttttttagttgtagtgaacatgtac
attgctgtcattttggagaactttggtgtggcgactgaagaaagtgctgagcctttgagt
gaggatgattttgaaatgttctatgaggtgtgggaaaagtttgacccagatgctactcag
tttatggaatttgaaaaactctcagagtttgcggctgccctggagccgcctcttcattta
ccaaaaccaaacaaggttcagcttattgcaatggatctgcccatggtaagtggggatagg
attcactgccttgacattttgtttgcttttacaaaacgtgttctgggagagagtggagag
atggatgctctccgcatacagatggaagaacgctttatgcaatccaatccttccaaagct
tcctacgagcccattacaactacattaaaacgaaaacaagaggagctatctgctgtcatt
atccaacgggcttacagacgttaccgtctcaaacaaacagtacagcaagcttcatttgta
tataaaaacaaaatagaaggaggggctggcctgcgcatcaaagatgaaattcttattgac
aagataaatgaaaactcatacacagaaaaaacagacctaaccatgtcaacagctatttgt
ccaccatcctatgatcgtgtaaccaagcccattgaagaaaaacatgaaaaagaaggcaaa
gatgtacagaagaaaaaataa
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