Sceloporus undulatus (fence lizard): 121931961
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Entry
121931961 CDS
T07740
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04140
Autophagy - animal
sund04148
Efferocytosis
sund05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121931961 (VPS16)
04148 Efferocytosis
121931961 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121931961 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121931961 (VPS16)
Membrane trafficking [BR:
sund04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121931961 (VPS16)
Hops complex
121931961 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
121931961
NCBI-ProteinID:
XP_042326077
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All DBs
Position
5:complement(190180376..190205750)
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AA seq
834 aa
AA seq
DB search
MDCYTANWDPLGEAAYYRKLDLYSMGWSLKEDLQDCLVAAAPYGGPIALLKTKKEKSPSS
RPPLEIYTSSGVLLASIPWKNSPAVHLGWTTSEDLLCVQEDGSVLVYSLFCEFKKCFSMG
NEVLQNRVLEAKVFHTEYGTGVAILTGAHRFTMTTNIADLKLRRLPEVPGLQKPPSCWTV
LCQDRVTIILLAVGQDLYLLDNTTCSLVTLPGLSPQAGSYLRMAVSFNYRFLALFTDTGY
LWTGRSHLKEKLGEFNCEFRAPPKQMVWCTRSRSKQRAVVMAWDRRLLVAGKGDQCIQYP
LDEESYLVPELDGVRIFSRSTHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQK
ADEYLREIKDQNLLPEAVRQCIEAASYEHEPEIQKSLLRAASFGKCFIDKFPPESFVETC
RDLRVLNAIRDYQIGIPLSFDQYRQLTTEVLLDRLVLRRLYPVAIKICEYLRLSEFQGIS
RILAHWACYKVQQKDKSDEEVAQAINQKLGDTPGISYSEIAARAYDCGRTELAIKLLEYE
PRSGKQVPLLLKMKRSQLALSKAIESGDTDLVYTVILHLKNELNRGAFFMTLQNQPVAMS
LYRQFCKHQELDTLKDLYNQDDDHQELGNFHVRSSYVNEKRIEGRVSSLQNAVDEYYKAK
NEFAAKATEDQIKLLRFQRRLQDDFDKPYLDCSLHDTVYNLILEGNHKRADQLYRDFKIP
DKRFWWLKINALAEQGDWEEMEKFSKSKKSPIGYLPFVEICMKHHNRHEARKFAPRVAPE
QRVKAFLLVGDLNQATEAAIERKSEAEMNLILSKCNDATITAKINHAKAQLGKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggactgctatacagccaactgggatcctttgggggaagcagcttattacaggaaacta
gatctctacagcatgggctggagcctgaaggaagacttgcaggactgcttggttgccgct
gctccttacggaggacccatcgcgttgctgaaaaccaagaaagagaaatctcccagttcc
cgtcctcctctcgaaatctatacttcatccggggtcctcttagccagcatcccatggaag
aacagcccagcagtgcacctcggctggacgaccagcgaggacctcctttgcgtccaggag
gatggctcagtccttgtctacagcctcttctgcgagttcaagaagtgcttcagcatgggc
aatgaagtgctgcagaaccgtgtgctggaggccaaagtgtttcacaccgaatacgggacc
ggtgtggccattctcacgggggcacaccgcttcaccatgactaccaacattgccgatttg
aagctccgccggctgcccgaggtgccaggtcttcagaaacccccctcctgctggacagtc
ctgtgccaagacagagtgaccatcatcctccttgccgtggggcaagatctgtacctcctg
gacaatacgacctgctccctagtgactttgcctgggctgagtccgcaggcaggctcctat
ctgcggatggctgtctcttttaactaccgcttcctggccctcttcaccgacaccggatac
ctctggacggggaggtcccacttaaaggaaaaactgggtgagttcaactgtgagtttcga
gctccgccaaagcagatggtttggtgtacgcggtcacgcagcaagcagcgtgcggtggtc
atggcttgggatcgacggctcctggtggctgggaaaggagatcagtgcattcagtaccct
ctggatgaagagtcataccttgtgccggagctggatggtgtgcgaattttctcccgctcc
actcatgaattccttcacgagattccagaggccagccaggaaatcttcaggattgcctcc
atggcacccggagctttgctgctagaggctcagaaggagtacgagaaagaaagccagaag
gcagatgaatatttgcgggagatcaaggaccagaatttgctccctgaagcagtcaggcaa
tgcattgaagccgccagctacgaacacgagccagaaatccagaagtctcttctccgggcg
gcctcctttgggaaatgcttcattgacaagttcccaccggaaagctttgtggagacgtgc
cgagacctacgggtgctgaacgccatccgcgattaccagatcggcatccctctcagcttt
gaccaataccgacagcttaccactgaggttttactggacaggctggttctgcggagactt
tacccggtcgctatcaagatctgtgagtacctgcgtctctctgagttccaaggcatcagc
cgaatcttggctcactgggcttgttacaaggtgcagcagaaagacaagtctgatgaagaa
gttgcacaggccattaaccaaaaactgggtgatacccctggcatctcatattcagagatc
gctgctcgggcatatgactgcggacggacagagctggccattaagcttctggagtatgag
cctagatctgggaagcaggtccctctgctgctgaagatgaagaggagccagctggcattg
agcaaagccattgagagtggagacaccgacttggtgtacaccgtcatcttgcacctgaag
aatgaactcaaccgtggcgctttcttcatgaccctgcagaaccagccggttgcgatgagc
ctctatcggcagttctgcaagcaccaggaactggacacgctcaaagacctctacaaccaa
gacgatgaccatcaagagcttggcaactttcatgtgcgctccagctatgtcaatgagaag
cggatcgagggtcgtgtatccagtttgcagaatgcagtggatgagtattacaaagcgaag
aatgagtttgcggccaaggccacagaagaccagatcaagcttcttcgctttcagcggcgc
ctccaggatgactttgacaagccatacctggactgttccctccatgacactgtttacaac
ctcattctggaggggaaccacaagcgagctgatcagctttatcgggatttcaagatcccc
gacaaaaggttctggtggctgaagatcaatgccctggctgaacaaggagactgggaagag
atggagaagttctccaaatcgaaaaagtcccccatcggatacttgccttttgttgagatc
tgtatgaagcaccacaaccgccatgaggccaggaagtttgctccccgtgttgctccagag
caaagagtgaaggccttcctcttggttggggacctgaaccaagctacagaggctgccatt
gaacgcaaaagcgaggccgagatgaacctcatcctgtccaaatgcaacgatgccaccatc
actgccaagatcaaccatgctaaggctcagcttggaaagaagtaa
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