Sceloporus undulatus (fence lizard): 121931990
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Entry
121931990 CDS
T07740
Symbol
DDX47
Name
(RefSeq) probable ATP-dependent RNA helicase DDX47
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sund03009
]
121931990 (DDX47)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121931990 (DDX47)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121931990 (DDX47)
Ribosome biogenesis [BR:
sund03009
]
Eukaryotic type
90S particles
Helicases
121931990 (DDX47)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121931990 (DDX47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SWI2_SNF2
AAA_19
Motif
Other DBs
NCBI-GeneID:
121931990
NCBI-ProteinID:
XP_042326127
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All DBs
Position
5:complement(41316450..41330386)
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AA seq
446 aa
AA seq
DB search
MAAGMDQEEADTGTVKAFKELGVTDVLCEACDQLGWKTPTKIQVEAVPLALQGRDIIGLA
ETGSGKTGAFALPILQALLETPQRFFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVG
GIDMMAQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV
DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYIFIPSK
FKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNK
FKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVT
QYDVELFQRIEHLIGKKLPAFPTQEEEVMMLTERVAEAQRFARMELQQKGEKKKRSREEA
NEPDDAEGAMGVRNKVAGGKKKKRKP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcatggaccaggaggaagcggacactgggactgtgaaagcctttaaagag
ctgggagtaacagatgtgctgtgtgaagcctgtgatcagttgggatggaagacaccaaca
aagatccaagtggaggctgttccacttgcactccaaggccgggacatcattggcttagca
gagacaggatctggaaaaacaggggcatttgctttgccaatccttcaggcactcttagag
actcctcagcgcttctttgctttggtactaacacccacccgggagttagccttccaaatc
tcagagcagtttgaggctcttggatcttccattggtgttcagactgctgtaatcgttgga
ggaattgacatgatggctcagtctctggccttagctaagaagccacatgtaatcattgct
actcctggtcgtcttattgaccaccttgagaacacaaagggttttaatttgagagctctg
aagtacctggtgatggatgaagctgaccggattctcaatatggactttgaaacagaggta
gacaagatactgaaagtgattcccagagacaggaagacatttctcttttctgctacaatg
actaaaaaggtgcaaaaactccagcgggctgctctcaaggaccctgttaaatgtgcagtt
tcatctaaataccagacagttgaaaagcttcagcagtactatatttttatcccttccaag
ttcaaggacagttatcttgtctatatccttaatgaacttgctgggaactctttcatgata
ttctgcagcacatgcaacaatactcagcggacggctctactgcttcgcaatctgggcttc
acggccatccctctccatggacagatgagccagaataagcgattagggtcactgaataag
ttcaaagccaaagcacggtccattctcttggcaacagatgttgctagcagaggcctagac
attccccatgtggatgttgtgataaactttgacattcctacccattccaaggattacatt
catcgggtgggacgaacagctcgggctggacgctctggcaaatcaatcacttttgtcaca
cagtatgatgttgaactcttccagcgtattgagcacctgattggcaagaagctgcctgct
tttcccacacaagaggaagaagtcatgatgctgacagagcgtgtggctgaagcacagaga
tttgctcgcatggagttacagcaaaagggggagaagaagaagcgttcccgagaagaggct
aatgaacctgatgatgcagaaggagcaatgggtgtcaggaacaaagttgctggtgggaaa
aagaagaaaaggaaaccttga
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