Sceloporus undulatus (fence lizard): 121932446
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Entry
121932446 CDS
T07740
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sund00535
]
121932446 (CSPG4)
04091 Lectins [BR:
sund04091
]
121932446 (CSPG4)
Proteoglycans [BR:
sund00535
]
Cell surface proteoglycans
Others
121932446 (CSPG4)
Lectins [BR:
sund04091
]
C-Type lectins
Others
121932446 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121932446
NCBI-ProteinID:
XP_042327008
LinkDB
All DBs
Position
6:complement(151029319..151118531)
Genome browser
AA seq
2377 aa
AA seq
DB search
MGSRLMVSGLLLLSQLLLETPLLHANPESGASFFGDGYVEMPLASTYTTVQLHVQFYSSQ
RSGLLFLAAGQTDYLLLELRAGILQARMDLGSEELTVKSPAGPYLNDLVIHDADLLVADG
QMTLMVDGLFNVSVEIPGPQQELDIEYGLYVGGTGSLELPYLTGVSAPFRGCLHAVTFND
RDALSALESGTKRSHGVREGCSVEFSAGPDDPLGFLGPNSYIAFPGWSARNEGSIEFVIT
TSIKQAPLIYQSGLESDFFYLEIFDGRLRGVVEKGNGLVVLHNNIYLSNEQDHYVKVYMD
VRRFEILVDYYASQTSNKGIHSHLDLQGPLFVGGLNEKAAARMRERGLAFMSGNNFSNSS
FVGCIEDLRVNQEKRSLQDALITRDITAGCGKLDQYSDYDDVYEQDEATTSSPLDNWQGP
VMEPCRPDPNLPPVFANFTKLLHVSPLVVAEGGTAFLEWRHTQPTIDLSSANIRQSQVLF
SVTTDPRHGELQLDLSRVRSKRKFTLLDIVNRKVKYVHDGSEGPMDQLLLEVTVTARGGI
PECLWQGQIYLLPIKINPVNDAPEVIFPHGDRMVILEHTRKHLNPDIIQALDDDTPCDSL
RFQLLGGKRMEEGYLEYDFHPGVPIEDFSCRDLEAGHVVYVHQNGPTSSLIVQVDDGMIM
SPVATLRVVAVEPDIQVRNNTGLFVAQGGVVPITTANLSVETNAVQQKVPILYRLTMPLQ
YGEIQKQGSLGGEWKKVESFHQQDVEQGRVQYFSTDEEHHTEDMIEKLQFVVQVGQKTLK
NNTFLIRIKRATIKMKTIVPLQMRNEKERNITTAEMEPALEEQGSSPEPFHYVIVQPPRK
GNLELRGTRLTEGFGFTQEDLQSHQLSYSATIRDSEETEDLFQFRVMAGAHYSPVYTYRI
QIGGDPDAPILTNVLLSVLEGGQATISKDHLFIKSASNANYLYEVIDGPTHGKLTWRTSE
HSPSSEEVITKFTNEDILQGHLVYQHDDSETMEDDIPFVAIKQEEGSSDLDAEDVRGVFR
VSIQPVNDHTPVQMVTKVFNVVRNGQRLMTTNDIAFVDEDSGFSDAQLVFVRKDILFGSI
IAADDRSRPVYRFTQDDLRKKRILFVHSGADRGWIQFQVSDGLHQVATLLEVQASDPYIK
INNHSGLVVHQGSQATIDSSVLSLETNMDIRNDEDILFRIIAPPKWGVVLRDGQEVSFFT
RKDLLAGDVLYHHHNGSRNPQDQIHLSVEANQVTVEEILKITIHLNSFPNPLNIVHNERI
HILQGEAVEIKSDYLLVEHEETSPHEIIYTITISPLSGFLVALSQGHTSDEPASLDPIQT
FTQEDINEGKVLYLHSSPEIQNDQFTVDITANGADALEGVVVDLEILPISIPLEVHNFTV
TEGSSQVLSMDVLNIPSTYFTALNVEFVILEAPEHGVFQNVERPEEDDLSVFSWYEVEHQ
LVRYVHDGSESLTDQFTVVANVSKVNQQSQPKMVAINIIPTNDEAPMLVVNLGLQIQEGA
TAEITSELLLSEDEDNPPEEVVYSIRRPINGKVVLKPSPNHTVQRFTQAQINRHLVQFIH
EGSLDGGFSFDLSDGENMSPGHFFAVRAQKKLSIVLEKKEDLTVCPGASQPIRSQNLKAV
TNEEGETQSLLYIIEQPPQFGKLLNSQKDSDGEQLRNFTQSEVDAGVISYYHEMPSEPFW
SLEDAFHFHVSSPSITTDPYILGVSVSFENSCPQQATRLWKNKGLTVPEAQSKVIDVSLL
DASNLLAYKEPDSKTPSYDVVFLVTQLPSYGTLSVPDGPVNRKHPYFLQSDIAAGGLEYA
HHGPGTMVDHFRFSAWLRHSSVKSIQPPQKEEGPVISGTFNITVRDSNEVPPRLVSQGHV
LRVLHGSSLRISQEHLNVMDPDSSPEEIKYDILSGSSSGFVTQVQNKQVPVTQFTQADIN
AGHLMFIANGTSSSGTLDFAISDGHNPTIFTSLEIMVVPAITWATNQTLLEIPQGPNMAS
LSHHHLLGTLDKEEGNTLYRIIGGPQFGQIKVNQKPVSEFSQKQVDDGEVMFTFTDFASS
EDEFQFLATSGAVNISGVVSVAVKALVKMKQDALWPGGTTIQLDTSILDASELANKTKSN
PEFKILQAPQRSQFVKLSRDQTNQLVPIDTFTQHDLEQGLVGLEILGMEDSEENRKHDEF
LFELVAQGVPPALESMGYTTEAFNSSAPYGVTLLRAPNLEEEELNTTPQSITLSPQTLPT
SLPQTENPSQNPSELPAHPTAWPGQGMTTLPPPAERGTLLGFIEANMFSIILPICLILLL
LALILPLLFYLHKRNKTGKHNVQGTPPKYKNGTVVDQETFRKTDPNQGIPLSTVSTLEAK
EAGLNSKGVGPGGQQDPELLQYCRTSNPALKNSQYWV
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atggggtccaggctgatggtgtcgggccttctacttctgtcccagctccttctagaaacg
ccattgcttcacgcaaacccagagtctggagcatccttctttggagatggctacgtggaa
atgcccttggcgagcacttacaccaccgtccagcttcatgtccagttctactctagccaa
cgcagtggactccttttcctggctgcagggcagaccgattatctccttctggagctccgt
gctggcattctacaggccagaatggacctgggctcagaagaactgaccgtcaagtcccca
gcaggtccctatctcaatgacctcgtgatccacgatgccgacctgttggtggcagatggg
cagatgaccttgatggtggatggcctcttcaacgtgtctgtggaaatcccagggcctcag
caagagctggacattgagtatggcctctatgtgggaggaacagggagcctggaactgccg
tacctcaccggagttagtgcacccttcagaggctgtctccatgcagtgacattcaatgac
cgcgatgccctctctgccctggaatcaggcaccaagagatcccatggtgtccgagagggg
tgtagcgtcgagttctccgctgggcctgatgatccccttggtttcctcggaccaaactct
tacattgcattccctggctggagtgcgagaaatgaaggatccattgagtttgtgatcacc
acaagcatcaagcaagctcctctgatctaccaatcgggactggagagtgacttcttctat
ctggagatctttgatgggcgtctcagaggagtggtagagaaggggaatggtctcgtggtg
ctccacaacaacatctacctcagcaatgagcaggaccactatgtcaaggtctacatggat
gtccggaggtttgagatccttgtcgactactatgcctcacagacctccaacaagggaatc
cacagtcaccttgatctccaaggacccctctttgttggaggtctgaatgagaaggccgct
gccaggatgagagagcgtgggttagcatttatgtctggaaacaacttctccaatagctcc
tttgttggctgcattgaagacttgagggtgaaccaggagaaaagaagcctgcaagatgct
ctcatcactagggacataacagctggctgtgggaagctagatcaatactcagactatgat
gatgtatatgagcaagatgaggccaccacaagctcccctctggacaactggcagggccca
gtcatggagccctgccgtcctgaccctaatcttcctcctgtctttgctaacttcaccaaa
cttctacatgtcagtcctctcgttgttgctgaaggtggaacagcttttctggaatggcgc
catacccaacctaccattgacctaagcagtgcaaacatccggcagtctcaggttctcttc
agcgtaaccactgaccccaggcatggagagctgcaactggacctctcccgggtgaggagc
aaaaggaagttcactctattggacattgtgaatcgaaaagtcaagtatgtccatgatggc
tcggaaggacctatggatcagctgctgttggaggtgacagtcactgccaggggagggatc
ccagagtgtttgtggcagggtcagatatatttgctgcccattaagatcaacccagtcaat
gatgctcctgaagtcatcttcccacatggagatcgcatggtcattctggagcacacacgc
aagcatctcaacccagacattattcaagcccttgatgatgataccccctgtgacagcttg
aggttccagctgcttggagggaaaagaatggaagaaggttacttggaatatgacttccat
cctggagtccccatcgaagacttttcctgcagggacctggaagcaggccacgtggtctac
gtccaccaaaatggacccacttcatcactcattgtccaggttgatgatggcatgatcatg
agcccagtggctaccttgagggtggtcgctgtggagccagatatccaggttcgcaacaac
acaggcctctttgtcgcacaggggggtgttgttccaataaccacagccaacctctctgtg
gaaaccaatgcagtccagcaaaaagtacccatcctgtatcgcttgactatgcccctgcag
tatggcgaaatccaaaagcaagggagcttgggtggagaatggaagaaagtagagtccttc
caccagcaagatgtggaacaaggacgtgtccagtatttcagcacagatgaggagcaccac
acagaagacatgattgagaagctgcaatttgtagtccaagtgggtcaaaagactttgaaa
aacaacaccttcctcatcaggattaaaagggccaccatcaaaatgaagaccatagtccct
ctccaaatgagaaatgaaaaagagaggaatatcaccactgctgaaatggagccagcttta
gaagagcagggttctagcccagagccgttccactatgtaatcgttcagccacccagaaag
ggaaaccttgagctccgtggaacaaggctgacagaaggctttggttttacccaggaagat
ctgcaaagtcatcagctgagctacagtgcaaccatcagagactcagaggagactgaagat
ctattccagttccgtgtcatggctggagctcactactcccctgtatacacttacagaata
cagattggaggagatcctgatgcccccattctgaccaatgtcctcttgtctgttttagaa
ggaggacaggccaccatttccaaggaccacttgttcatcaagagtgccagcaatgccaac
tatctgtatgaggtgatagatggtccaacccacgggaagctgacctggagaacatcagag
cattcgccatccagtgaggaggtaataacaaaattcactaatgaagatattctccaaggc
catcttgtgtaccagcatgacgattctgagacaatggaggatgacatcccatttgtggcc
atcaagcaagaggagggaagctctgacttagatgctgaggatgtgagaggtgtcttcaga
gtttccattcagcctgttaatgaccacactccagtccagatggtcaccaaggtctttaat
gtggtgcggaatgggcagcgcctgatgaccaccaatgatattgcctttgttgatgaagat
tcaggcttctcagatgcacagctggtgttcgtaaggaaggacatcctctttggcagcatc
atcgcggctgacgacagaagccgcccagtctaccgcttcacccaagatgacttgaggaag
aaaagaattctctttgtccactcaggggccgaccgaggctggatccagttccaggtttct
gatggcctccaccaggttgctacccttctggaagtccaagcctctgacccttacatcaag
atcaacaaccacagtggcttagttgtccaccaaggcagtcaagcaaccattgactcttct
gtcctcagcttggaaaccaacatggacatcaggaatgatgaagacatccttttccgcatc
atagccccacccaagtggggagtggtgctgcgagatggacaagaagtgtcatttttcacc
cggaaggacctgttggcaggagatgttctttaccatcaccataacgggagcaggaatccc
caggatcaaatccacctctctgttgaagcaaaccaggtgacggtggaggagatactgaaa
atcacaatacatctcaattccttcccaaaccctctgaacattgttcacaatgagaggatc
cacatcctccaaggagaagctgtggagattaagagtgactacctgctggttgagcatgaa
gagacatctccccatgagatcatctacacaatcaccatctctcccctctcagggttcctg
gtggccttatcccagggccacacctcagatgaacccgcaagcttggacccaatccagact
ttcacccaggaagacatcaatgaaggcaaggtcctctacctgcattccagccctgagata
cagaacgaccagtttacagttgacatcacggcaaatggggcagatgctctcgaaggggtt
gtggtggacctggagatcctccctatttccatcccactagaggttcacaacttcacagtg
actgaagggagcagccaggtgctctccatggatgtcctaaatatacccagcacttacttc
acggctcttaatgtggagtttgtcatccttgaagcaccagagcatggtgttttccagaac
gtggagagaccagaagaagatgacttgagtgtcttctcctggtatgaggtggagcatcag
cttgtccgatacgtccatgatgggagcgaatccttgaccgaccagttcacagtggtggcc
aacgtctccaaggtcaaccagcagagccaacccaagatggttgccatcaacatcatccca
accaacgatgaagcaccaatgttggtggtcaacctgggactgcagatccaagaaggcgcc
actgcagagatcacttctgagctccttctaagtgaagatgaagacaacccaccagaggaa
gtggtctattccatccggaggcccatcaatgggaaggtggtgttgaagccatcacccaac
catacggtccagcggttcacccaggcccagataaaccgccatcttgttcagttcatccat
gaaggatccctggatggagggttttcctttgatttatcagatggagagaacatgtctcca
gggcatttcttcgctgtgagggcccaaaaaaaattgtctattgttctggaaaaaaaggaa
gatctgactgtctgcccaggtgcttctcagccaataagaagccagaatttgaaagcagtg
accaatgaggagggagaaacccaatctctattatacatcattgaacaacctccccagttt
ggcaagttgctcaatagccagaaggacagcgatggagagcagctgaggaacttcactcaa
tctgaggtggatgccggagtgatatcatactatcatgaaatgccatctgagcctttctgg
agtcttgaggatgcttttcacttccacgtttcttctccatccataacgacggatccatac
atccttggagtgtcagtatcatttgagaacagctgtccccagcaagccactcggttgtgg
aagaacaaaggcctcactgttccagaagctcaaagcaaagtgattgacgtctcgctactg
gatgcttccaacctccttgcctataaagaacctgactccaaaacaccctcctatgatgtg
gtatttctggtcacacagctaccttcctatggaaccctgtctgtccctgatgggccggtg
aacagaaagcacccctatttcttgcaatctgacattgctgcaggtgggttggaatatgct
caccatggacctggcaccatggttgaccattttcgatttagtgcttggctccggcatagc
agcgtgaaatcaattcagcccccacaaaaagaagaaggtcctgtcatttctggaacattc
aacatcactgtgagggacagtaatgaggtgccaccgcggctggtcagccaaggacatgtt
ctacgggtccttcatggttcatctttgaggatctcccaagagcacttaaatgtcatggac
cccgatagctccccagaagaaattaaatatgacatcctttctgggtcctccagtggtttt
gtgacccaggtccaaaataagcaggtgcctgttacccagtttactcaagcagacatcaat
gcagggcacttaatgttcatcgccaatggaactagctcttctggaaccttggactttgcc
atctctgatggacacaatccaactattttcacttccttggaaatcatggttgttccagca
attacctgggcaacaaatcagacgctcttggagataccacagggtccgaacatggcctcc
ttgtcccaccaccatcttttagggactttggacaaagaggagggcaatactctttacagg
atcattggggggccccaatttggccaaatcaaggtcaatcaaaagcctgtgagtgaattt
tcacagaagcaagtggacgatggagaagttatgtttaccttcactgattttgcctcctct
gaggatgaattccagttccttgccacatcaggagcggtcaatatatcaggtgtggtgagt
gttgcagttaaggccttggtcaaaatgaaacaggatgccctctggccaggaggaaccaca
attcagctggacaccagcatccttgatgcgagcgagttggccaataagacaaagagtaat
ccagagttcaaaatcctccaggctccccaaagaagccaatttgttaaattatctagagac
caaacaaaccaacttgtcccaattgataccttcactcagcatgatctcgagcaagggctg
gttggcttagaaatcttggggatggaagactctgaggaaaaccgaaagcatgatgaattc
ctgtttgagttggtggctcagggagttccccctgctttggaatctatggggtatacaacc
gaggccttcaactcctcagcaccctatggagttacgctgctcagagcaccaaatcttgaa
gaagaggaactcaacaccacaccccaaagcataaccctttctccccagacattacctacc
agtctgcctcagactgaaaatcccagccaaaatcccagcgagctgccggctcatccaaca
gcatggcctggtcaagggatgacaacattgcctcctccagcggaaaggggcacactcctc
ggtttcattgaagccaacatgttcagcatcatcttgcccatctgcctcatccttttgctc
ctggccttgatcctgcccttgctcttctacctccacaagcggaacaagacggggaagcac
aacgtccaagggacgccccccaaatacaagaacgggacagtggttgaccaggagaccttc
cggaagaccgaccctaaccaaggcattcctttgtcgacagtcagcacactggaggccaaa
gaagcgggactcaactcaaaaggtgtagggccaggaggacagcaggacccagaacttctc
cagtattgtaggacatccaacccagccttaaagaacagccaatactgggtctga
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integrated database retrieval system
