Sceloporus undulatus (fence lizard): 121933085
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Entry
121933085 CDS
T07740
Symbol
SMARCD3
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121933085 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121933085 (SMARCD3)
03036 Chromosome and associated proteins [BR:
sund03036
]
121933085 (SMARCD3)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121933085 (SMARCD3)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121933085 (SMARCD3)
PBAF complex
121933085 (SMARCD3)
GBAF(ncBAF) complex
121933085 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
121933085
NCBI-ProteinID:
XP_042328268
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All DBs
Position
6:560..37945
Genome browser
AA seq
503 aa
AA seq
DB search
MAAEEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYVGSPSVRPGM
PPATMEPTRKRAAPXQQGQQQQAPTPQQTTPQQQQTTQGPQGPPRQQGGATQSRPRSAKR
RKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLY
ISNTFNPAKSDADDSDGSIASWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPD
NHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTR
SAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIV
INHIISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESIN
QLKIQRDFMLSFSKDPKGYIQELLRSQSRDLKVMTDVVGNPEEERRAAFYHEPWSQEAVS
RYFYCKIQQRRQELEQSLGVRNT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggaggaagtgactggcggggcgcggaaggcgacgaagagcaaacttttcgag
ttcttggtccatggggtgcgcccggggatgccgtcaggtgcgcgcatgccccaccagggg
gctccaatgggtcccccaggccccccctacgtcgggagcccctctgtgcgccccgggatg
cctccagccacgatggagcccacccgtaagagggccgcccccnnccagcagggccagcag
cagcaagcgccgacgccgcagcagacaacgccacagcagcagcagacaacccaggggcca
cagggccccccccggcagcagggcggcgccactcagagccggcccaggagtgctaagcgc
aggaaaatggctgacaaaatcctcccacagaggatccgggaattggtgccggagtcgcag
gcctacatggacctcctagcctttgagcggaagctggatcagacaatcatgcggaagcgt
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcggaagttgcgcctttac
atctccaacaccttcaatccggctaagtcagatgcagacgactccgacgggagcattgcc
tcttgggagctacgtgtggaaggaaagctccttgatgatctcagtaaacagaaacggaag
ttttcctccttcttcaagagtttggtcattgagctggacaaggacctctatgggccagac
aaccatctggtggagtggcaccggacgcccaccacccaggagacggacggcttccaggtg
aagaggcccggggacgtcagcgtgcgctgcaccctcctgctcatgctggattaccagccc
ccacagttcaaactcgacccccgtctggcccgcctgctgggcatccacacgcagacgcgc
tcggccatcatccaggcgctctggcagtatatcaagacgaacaagctgcaggactcccac
gacaaggagtacatcaactgtgacaagtacttccagcagatctttgactgtccacgactg
aagttctctgaaatcccccagcgcctgacgaatctgctgctgccccctgaccccatcgtc
atcaaccacatcatcagtgtggaccccaatgaccagaagaagacggcctgctacgacatt
gacgtggaagtggaggacccactgaagggccagatgagcagcttcctcctctccacggcg
aaccagcaggagatcactgccctggataacaagattcacgagacaattgagtccatcaac
cagctgaagatccaacgagacttcatgctcagcttctccaaagaccccaagggctacatc
caggagctcctccggtcccagagcagggacctcaaggtcatgacggatgtggttgggaat
ccggaggaggagcgccgtgcagcattttaccatgagccatggtcccaggaggccgtcagc
cgctacttctactgcaagatccagcagcgtcggcaagagttggagcagtctctcggggtg
cgcaacacataa
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