Sceloporus undulatus (fence lizard): 121933239 Help Entry 121933239         CDS       T07740                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism sund  Sceloporus undulatus (fence lizard) Brite KEGG Orthology (KO) [BR:sund00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sund03400]     121933239 (SPG11) DNA repair and recombination proteins [BR:sund03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      121933239 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  121933239 NCBI-ProteinID:  XP_042328621 LinkDB All DBs Position 6:169434215..169458189 Genome browser AA seq 2425 aa AA seqDB search MMAEAVRVLLLPPPPLGGPGPGRAKLSRGGPEALLGVLAAEGLRLEGPLRRGKEGDGAPR LLGGQWADFLWESADGEGPAAQGLRLLALSKTQGLGLYAVTLEAGRCNAALLGTMDADGM KKALLASKEIRLASLSSLKLLSFTNGKALLLLNNFILVHLAFPAGELEAVMLKDCFVLNL SPQASERIADVTVCRDILFLLDESGWIYFFDATDGTYLAYVSVSLYLAEGQEEKDADILP RLTQLNVSYDLSVAVIANCCNCVASVDLHLYFKQYPDHLLCKRNFDSLPTDQWKGADEDD LRSSEHSMKHVQHAFRTDRSWKAHLSSLHDTTERLYSPYLLPDGPFPWYQHLLHLEHPDC RTHEISETSLLQDVAYILSDSRGKGNTSRSKKDRQWKSIHSGDSEDSVKLECKSVTGFSA LFTISSECKGLSIVLWDLETQEMAHSHVGENSFFVECNKREEQLCVILSESGLSLFLFGL TQEEFLNRLIIHGNAGTVDSLCRLNGWGRCSIPIHALEAGLENRQLDTVNFFLKNKENIF SLSSSCSLQGQPASIVSDLYLKNMKELRPALDLLCLAIQESDLEAQSKHFSEQLLNLTLS FLNKQLCEIFTHREELDENLDRCVDILTSYITRLRMFMIKFPLKSPSAGNLPCDLEEDVP AIEESHIWEELDTERIVAEAILNNKLPEAQTFFRLTHNSAQHLKELIQIGLDLVYKTLLK DDIKEASRLLRNMGFNVKEQLHRICFYVSDQHVRDYLVDRLQEENCFSETEKEIIDFVHR VENVYSGAIQENGESTGQSRYWKKEQDLSTHIATLGALLNRDEDKKQRVLLNWAQWWDQL MQEMILLPKQSDEDLKSCNPEVLWMYLTSWHDWANISSWITDSQQQDGSMKWPQLTIETI NQSTLCSRYMRNEILDNLARNGTFIPAELDNFECLLQRLTLVGGVMQNPHPVPRYTTSGG LDFHSCFVLYCLEHGLDHLLYTYLDYYSLFSSNCPILNDKALHEAHPWFEFLVYCRSIAS SPGDANLIFQASLANAQILIPSNQASVSTMLLEGRTLLALATTMYTSGGIDQVVRNGDRG EKVDTQLFRMALAPYPKLRAALFPQCTLHGLLPPDISLYHLLQSLVPFDPAKLFGWQSTN ALAIPDICSDLPHFSCPTLVNKYAIVERLDFSYYLRHKRPSFAFGTFIVQQLVKSKTPKQ LIQQAGTEAYSLALSSFYVPSVAAACVCFLELLGLDSLKLRVDVKAANVILSFMSRREEP QHNSIRQSLVEKLTELASGQKTAAEELLLCLEEAVWDKIEHQDTEKTSSDARKQWSLVVQ FCRLHNIKLSPSYLKVCARSNKWLQFIIEAQMYSYQLSEVIPILRDFPCPLQDHMRLALE TLQTSDCSQLENQGSSSNPLKWEPKSNTDELFYILLQCQKQPHPWRYLLGEAVKHHVPVL STLAACFQDAPIIHCLCVWIITSLDSSTMAEVTNLIEGSLETHEWHLMDLATLWQTLLRR QKSRTLLLGFQFFLKDSPLKMMLDVYELCMDYKNYSEASTKLLAFQDSLSKLQGTLELPD PTLPLPWMELQASFLLELMLQQCRTEYELGKLLQLFADTDTLLPHGPEMKKLSALTRILK GSPVSVDRALLSNYTPENFQKECRRILGQLQERNSFSVARSVAELAELPVDNVVIQEVLQ NIRHLKQIGHWPQKRTRIEFWKKCHENYVRNAISKQAASDFFLAQAESVSEPAGGEKTCS LLERQLLLTLAGHWLAKSDPVPLSELERIEKEIWLCCITQQALSQSTVQAPHTFTHQISV TGELSFDSLAREFSFSKLAALNVPEYLRLEGLPHPDASPDPLLGAEVESLSCLIGRLLDE GSVHEASRVSRYFNFYSRDVSLVLHCRALASEEAPQSWFHPEIQAILATQEKGGSKEEEK KKDGEEVPQKNRLQSTSSLEGWSFVGVSCANSEIVGGLQALTAQCVHGRNYCRQVLCLYE LSKELGCSFSEISAHDPEKLLRVILSSQQPDRCKRAQAFISTQGLGPENVAELVADEVMR ELLAPSHRKDGQKQVLNPAEESEAFLQLAKLCPDRILVGMKLLDKIASVPPGELACTTEL LILAHNCFSLTCHMEGITRVLQAARLLTDEHLAPSEEYGLVVRLLTGIGRYNEMTYIFDL LHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAA AHIQLKLIESQPWEECLQNVPGLKKLLMKALTLFIDAAESYSKDFCVRQSLRCNRLTKLI TLQLHFLNTNQSTKLINLSRRSLLECLMSLPRFYQAAIVAEAYDFVPDWAEVLYQQVIVK GDFNYLEEYKQRGLLKASIIEEIARKLKQHPSSEPALRNLKKLLTYCDDIYVYYKLAYDN QFYDVVNMLLKDAQTGCCLNDLLAN NT seq 7278 nt NT seq  +upstreamnt  +downstreamnt atgatggcggaggccgtgagggtcctgctgctgccgccgccgcccctcggaggccccggc cctggtcgggccaagctcagccgcggaggccccgaggccctgctgggggtcttggcggcg gaggggctgcgcctggagggcccccttcgtcgggggaaggaaggcgacggagccccgagg ctcctgggcggacaatgggcagacttcctctgggagagcgcagacggcgaagggcccgcg gcccagggcctccgactgcttgctctcagcaagacccagggccttggtctctatgcagtg actctggaggctggaaggtgcaatgcggcgcttctggggacgatggacgcagacggcatg aagaaggcgctgctggcttccaaggagatccgtttagcttcactctcctctttgaagctg ctgtcatttacaaatggcaaggctttgttgctgctcaacaactttattcttgtacatctc gctttccccgccggagaactggaggcagtgatgctgaaggactgctttgttctcaatctg tcaccgcaagcgtcagaaaggatagcagatgtgaccgtctgcagagacatcctcttcttg ttagatgagtctggatggatatatttttttgatgcgacagatggaacatacctggcctat gtcagtgtttccctctacctagcagaaggacaagaagaaaaggatgcagacatcctgccc cgtcttacacagttaaatgtatcgtatgaccttagcgtggctgtgattgccaattgctgc aattgcgttgcttctgtcgaccttcatttatacttcaaacaatatcctgaccacttactt tgcaagagaaattttgacagccttcccacagatcaatggaaaggagcagatgaggatgac ctcagaagttcagagcacagcatgaaacatgtgcagcatgcattccgaacagacaggtcc tggaaggcacacttgtcgtctttgcatgacacaaccgaaaggctttattctccatacttg ttacctgatggtccctttccttggtatcagcatcttctccacctagagcaccctgactgt aggactcatgagatttctgagacctcccttcttcaagacgtggcttacattctttcggat tcaagagggaagggaaacacgagcagaagcaaaaaggatagacagtggaagagcatacat tcaggcgactcagaagactcagtgaaacttgagtgcaaatcagtgacaggctttagtgca ttattcactatctccagtgagtgcaaaggacttagtattgtgctgtgggatttggagact caggaaatggcgcattctcatgtgggggaaaattccttttttgtggaatgtaacaagaga gaggagcaattgtgtgtcatcctttcagagtctggtctctccttgttcttgtttggcttg actcaagaggaattcttgaacagactgataatccatggaaatgctggcactgtggattct ctttgtcgactcaatggatggggaagatgctcaattcccatccatgccttggaggcaggt ttagagaaccgtcaactggacactgtcaacttctttttaaaaaacaaggagaatattttc agtctttcttcgtcttgctcattgcaaggtcagccagcaagcattgtgtcagatttgtac ttgaaaaacatgaaagagttgaggccagctttggacctgctgtgtctggcaatccaagaa agtgatttggaagcgcagagcaagcatttctctgagcagctgctaaatctcaccctgtct ttcctgaacaagcaactctgtgaaatttttacacatagagaagagctggatgaaaatctg gacagatgtgttgatattttaaccagctacatcaccagactcaggatgtttatgataaag ttcccgcttaagtcacccagtgctggaaacctgccctgtgatctagaagaagatgtgcct gcaatagaagaaagccacatctgggaagagttagatacagagaggattgttgctgaagcc attttaaacaacaagttgccagaggctcagacttttttccgtctgactcacaactctgcc cagcatctcaaggagctgattcaaatagggctggatctggtttacaaaaccctgttgaaa gatgacataaaagaagcctccagactcttaaggaacatgggcttcaatgtcaaggagcaa ctgcacaggatatgtttctatgtgagtgaccagcatgtccgggactacttggtggacagg ctgcaagaggaaaactgtttttctgaaactgagaaggaaatcatagactttgtgcatcgg gtggaaaatgtttattcgggagccattcaggagaatggagagagtacaggccagtccagg tactggaagaaagaacaagacctttctacccacattgccactttgggtgcacttttgaat cgtgatgaagacaagaagcagagagttctcttaaactgggctcaatggtgggatcagctt atgcaagaaatgattctcctgcctaaacaatctgatgaagacctgaagtcatgtaatcca gaggttctgtggatgtatctgacatcttggcatgactgggcaaatattagttcatggatt acagattctcagcaacaagacggcagcatgaaatggccccaactaactatagagaccata aatcagagtacgttgtgcagccgttacatgcgaaatgaaatcttggataacctggccagg aatgggactttcataccagccgagctggacaattttgaatgccttctccaaagactgact cttgttggaggagtgatgcagaatcctcatcctgttccaagatatacgacttctggtggc ttagatttccacagctgttttgtcctttattgtttagaacatgggctggatcatcttctt tacacttatttagactattacagtttattttcttcaaactgccccattttgaatgataaa gcactgcatgaagctcatccttggtttgaatttctagtgtactgccgaagcattgccagc agtcctggagatgccaatttgattttccaggcaagtctggcaaatgcccaaatcttaatt cctagcaaccaggccagtgtgagtactatgctgttggagggacggacacttcttgccctt gccacaaccatgtatacatctggaggaattgaccaggttgttcggaatggagacagagga gagaaggtggatacccagctcttccgaatggcccttgcgccttatcccaagctcagagcg gccctcttcccccagtgcaccttgcatggactcctgcctcccgacatctctctctaccat cttcttcagtcattagttccatttgatcctgctaaattgtttggctggcagtcaacaaat gcacttgccattcccgatatttgcagtgatcttcctcacttctcttgccccactctggtc aacaaatatgccatcgtagaacgtctagacttctcctactacttgcgccacaaacgcccc tcttttgcttttgggacttttatagttcagcagctggtgaagagcaaaaccccaaagcag ctgatccagcaagcaggcactgaggcctactctttggctctctcttccttttatgtgcct tctgtggctgcagcctgtgtctgctttttggagctgctgggcttggacagcctcaaactc cgggtggatgttaaagctgcaaatgtaatcttgagcttcatgtctagaagagaggagcct cagcacaactctatcaggcagtccttggttgaaaagctaacagagctcgctagtggacaa aagacagcagcagaagagctccttctctgcttggaggaagcagtttgggataaaattgag catcaagacacagaaaagacatccagtgatgcaagaaagcagtggtctttggtggtccag ttttgccggctccacaacatcaagctgagtccatcttacctgaaagtgtgtgctaggtcc aacaagtggctgcagtttatcattgaagcccagatgtatagctaccaactaagtgaggtg atccccatcctccgggacttcccctgtcctttgcaagatcacatgaggctggccttggag actctgcagacctcagactgctctcagctggaaaaccaagggagcagctccaacccacta aagtgggagccaaagtcaaacacggatgagctcttttacattctgctgcagtgtcagaag cagcctcatccctggcgttaccttctgggtgaagcagtgaagcaccatgtacctgtcttg agtacgctggcagcatgcttccaggatgcccctattatccattgtctctgtgtttggata ataacatccttagacagctccaccatggcagaagtgacaaatctcatcgaaggctccctt gaaacccatgagtggcatcttatggacttggccaccctctggcagacacttttaaggagg cagaagagccgaacacttcttcttggctttcagttctttctgaaggattcccctttgaag atgatgctggacgtatatgaattatgcatggattacaagaattacagtgaagcctcaacc aagctccttgcatttcaagacagtctttcaaagcttcaaggcacacttgagctgccagat cccaccctaccattaccctggatggagttgcaggcctcatttcttcttgaactgatgcta cagcagtgtaggacagagtatgagctgggaaaactccttcagctttttgcagatacagac acccttcttcctcatgggccagagatgaagaagctgagtgccctcacccgcatcttgaag ggctcacccgtctcggtggatcgtgcccttctcagcaattatacccctgagaacttccag aaagaatgcagaagaattttggggcaactgcaagagaggaactctttctccgtggcacgg agcgtggcagaactggcggagctgcctgtggacaacgtggtgatccaggaggtgctccag aatatacgccacctgaaacagattggccactggccccagaagcggacaaggatcgagttc tggaagaagtgtcatgagaactatgtgagaaatgccatctcaaagcaagccgcctctgac ttcttcttggctcaggcagaaagcgtgtcagaaccagcgggtggagagaaaacttgcagc cttctggagaggcagcttttgcttaccttggctggccactggctggccaaaagtgaccct gttccactcagtgagcttgaacgcatagagaaggagatttggctttgctgcatcacccag caggctttgagccagagcacagtgcaagccccgcatacctttacccaccagatttcagtg actggcgagctgtcctttgactccttagccagggagttctctttttccaagttggctgct ttaaatgtgcctgagtacttgcggcttgagggcttaccgcaccccgatgcctccccagat ccgcttctgggcgcggaagtggaatcgctgagctgcttgattggccgcctcctggatgag ggcagcgtgcatgaagccagccgcgtttcccgctatttcaacttctacagcagagacgtc tcgctggtcctccactgccgtgcgctggcctccgaagaagccccccagagctggtttcac ccagagatccaagcaatccttgcaacccaggaaaaggggggaagcaaggaggaggagaag aagaaggatggggaggaggtgcctcaaaagaaccggctgcagagcacctcaagcttggag ggctggtcctttgtgggggtctcatgtgcaaacagtgagattgtgggcggcttgcaggca ctgacagcgcagtgtgtccatggacggaactactgccgacaggtcctctgcctctacgaa ctgtctaaggagctaggctgctccttcagtgagatctctgcacatgaccctgagaagctc ctccgggtaatcctgtcatctcagcagccggacaggtgcaaaagggcccaggcatttatc agcacccaggggctggggccagagaatgtggcagagcttgtggcggatgaagtcatgcgg gagctgctggcgccatcgcacagaaaagacgggcaaaagcaggtcctgaatcccgcagag gagagtgaggcgtttctgcagctggccaaactgtgccccgaccgcatcctggttggcatg aagctgttggataaaattgcatcggtgccccctggagagcttgcttgcactacagagctc ctgatcctggcccacaattgtttcagcttgacttgccacatggaagggatcacgcgtgtc ctccaagctgcccggctgctcacagatgaacacttggcacccagcgaagagtatgggctt gtggtccggctccttactggcattggcagatacaatgagatgacgtacatcttcgacctg ctacatgagaagcactactttgaggtgctgatgagaaagaagctggatccgagcgggacg ctcaagacggccctgctagactacatcaagcgctgccgcccgggggacagcgagaagcac aacatgattgcgctctgcttcagcatgtgccgggaaatcggggagaaccatgaggcagca gctcacatccagctgaagctcattgaatcccagccatgggaggagtgtctccaaaatgtg ccaggcctgaaaaaactcctgatgaaagccctgacgctcttcattgatgctgccgagagc tattccaaggacttctgtgtgcgccagtccttgcgctgtaaccggctgaccaaactcatt acgctgcagctccattttctcaacaccaaccagagcacaaagctgatcaacctgagcagg aggagtctgctggagtgcctcatgtccttgcccaggttctaccaggctgccattgtggct gaagcctatgactttgtccctgactgggcagaggtcctctaccagcaagtgattgtgaag ggtgacttcaactacttggaggagtacaagcagcggggcctgctcaaagccagcatcatc gaggagattgcccgcaagctcaagcagcacccaagcagtgagcctgccctgagaaacctg aagaagctcttgacctattgcgacgacatctacgtctattacaaacttgcatacgacaac cagttctacgatgtagtgaacatgctcctcaaggatgctcagacaggctgctgcttgaat gacctgttggcaaactag

DBGET integrated database retrieval system