Sceloporus undulatus (fence lizard): 121933298
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Entry
121933298 CDS
T07740
Symbol
CNOT3
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121933298 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121933298 (CNOT3)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121933298 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121933298 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
121933298
NCBI-ProteinID:
XP_042328754
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Position
6:complement(106642269..106674373)
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AA seq
717 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSINVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEMFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEISQSP
AKNGSKSLHNNHHQPPPTIPSSYPLGSSSSTSSSLGNGPGSNSNGAVAGSGNASSKANPP
AGHAPTTPTPYAQAVAPPPTSTNASQPRPPSTQQNASKQNGATSYSSVVADSSSDSTLSS
GSQSLPNQTASHNPPSASTKEPSAAPQPPSGGNSTGSSLLVPLTANPPASPTPSFSDSKP
AQTLLNGPPQFSSTPEIKAPEPLSTLKSMAERAAISSSIEDPVPSLHLAERADILITSTT
SQPASNQPPIQLSEVSIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQ
YLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSW
RFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagaggaagctacaaggtgagattgatcggtgtttgaaaaaggtatcggaa
ggtgtggagcagttcgaagatatctggcagaagctccacaatgcagctaatgcaaaccag
aaggagaaatatgaagccgatctgaaaaaggagattaaaaaactccagagactgagggac
cagatcaagacatgggttgcatccaatgagataaaagataaaaggcagctagtagacaac
cggaaactcattgagacgcaaatggagaggttcaaagtagttgaacgtgagaccaagacg
aaagcctactccaaggaggggctgggactggcgcagaaagtggacccagcccagaaggaa
aaggaggaagttgggcagtggttgacgaatacgatagacaccttgaacatgcaagtggat
cagtttgagagtgaggtggagtctctctctgtccagacacgtaagaagaaaggagacaag
gataagcaagaccggatagaaggtttgaagcggcacattgagaagcatcggtaccacatt
cggatgctggagacaattttacgcatgctggataatgactccattaatgtggactccatc
cgcaagattaaagatgatgtggagtactatgtagactcctcgcaggaccctgactttgaa
gaaaatgagttcctttatgatgacctcgacttagaagacattccacaggccctggtagcc
acttccccacccagccacagccacatggaggatgagatgttcaaccagtccagcagtaca
cctacatccaccacatccagctccccaatcccacccagccctgcaaactgcacgacggag
aactctgaagatgataagaaacggggacggtcaacagacagtgaaataagccaatcccct
gcgaagaatggttcaaaaagcctccacaacaaccaccatcagcctcctcccactataccc
tccagctacccactgggcagtagctccagcacctcatcctcactggggaatgggcctggc
tccaacagcaatggagctgtggctggcagtgggaatgcaagcagcaaagctaaccctccg
gcagggcatgcacccaccaccccaaccccttatgcccaggctgtggcacccccacccacc
agcaccaatgcctcgcagccccggcctcccagcacccagcagaatgccagcaagcagaat
ggggcaacaagttatagctctgtggtagctgacagcagttcagattcgacactaagcagc
ggcagccaatcgttgcctaaccagacagcgtcgcacaaccctcccagcgcttccacgaag
gagcccagcgcagctcctcagccaccaagtggtggtaacagcactggatccagcctcctg
gtgcctctgactgccaacccacctgcctcacccacccccagcttttcagacagcaagcct
gcccagactctgctcaacgggccaccccagttcagctccacacctgagatcaaggcacct
gagcctctaagtacattgaaatcaatggctgagagggcagctatcagctctagcatagaa
gaccctgtgccatctctacaccttgccgaaagggctgatatcttaattacaagcacgacc
tcccagccagcctcgaaccagccccccatccagctatctgaggtgagcatccccctctca
cttggggtgtgccctctggggcctgtgcctctcaccaaggagcagctctaccaacaggcc
atggaggaggccgcctggcaccacatgcctcatccctctgattcagaaagaatccggcaa
taccttcctcggaatccttgtccaacccctccgtaccaccaccagatgcctcccccacac
tccgatactgttgagttctaccagcgcctctccacagagacccttttcttcatcttctac
tacctggagggcacgaaagcacaatacctggcagcaaaggcattgaagaagcaatcgtgg
cgcttccacacaaagtacatgatgtggttccagcggcacgaagaacccaagacgatcact
gacgaatttgagcagggcacttacatctactttgactatgagaaatggggccagcgcaaa
aaagaaggtttcacctttgaataccgctacctggaagaccgggacctgcagtga
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