Sceloporus undulatus (fence lizard): 121933480
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Entry
121933480 CDS
T07740
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04621
NOD-like receptor signaling pathway
sund05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121933480 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121933480 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sund04054
]
121933480 (NOD1)
Pattern recognition receptors [BR:
sund04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121933480 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
LRR_4
NOD2_WH
AAA_22
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
121933480
NCBI-ProteinID:
XP_042329209
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All DBs
Position
6:53330082..53389355
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AA seq
951 aa
AA seq
DB search
MEDQPGGDAEIIHQTATTVCPPSFVNLLKVHRELLVGKVRNTQCLIDNLLKNEYFSIEDA
EIAAQYPTQADKVRKILDLAQSKGEEVAEYCIYVLQQVADAYYELHPWLEEIGFHPSEVI
GNKPVENTDPVSRYHQKLKDELGRNTKFILSYAQKEDMLLEETYSASIMEFIKHNNEKLG
DVNVLEDLVSDSVGLINEDGETIFIFGDAGIGKSMLLQKMQNLWSKGEFNIGAKFFFRFR
CRTFSYFKQDEAICLKDLLFKYNCFPDQDPEEVFDFIVKFPHTVLFTFDGFDEIHSDFDL
NSIPELCSPSESIHPLALLVGLLTGKLLKGSRKVLTARTGTEIDKNIIRKKVYLRGFSTS
NLKEYTRMFFKDERCQTLVLNQLEANPNLCSLCSVPLFCWIIFKCFDHFHSTFDSHELQD
ITVTLTDIFLLMTEVHLNRTQKTNLLKKNTRSQVETYRTNKNILFSLSKIAHRGMQKSFF
VFEQDEVLIDLSEQDLHLGFLRAIPDYGSCSDQSSYEFLHMTLQSFFTALFLVMEEKVGA
KELLHFFAECSTLDTSLSNCFPITWLKNHRSTGEDPFRNNEHFHFTNLFLCGLLSKAKHK
LMRHLVPSACIKKKRRVLLAYFSESMKFHVKGLTRARLKDYKQLQVRPNFVWMLRCIYET
QSEKVGKGIVKNMRANYLKLTYCNAYSADCTAISFVLHHFQKHLALDLDNNNINDYGIKQ
LLPCFRKLTILRVSVNQVTDQGIRVLYEELSKYKIVTYLGLYNNQITDVGAKYVARLIEE
CPSLIYVKIGANNITTEGGKSLAYAIQKSKTMYEIGMWGNQIGDEGAKAFAEALRNHSTL
TNVSLAFNGITREGGKCLAEAMKHNNTVNIFWLTKNDLDDEAAEGFGEMLKVNKRLGHLW
LIQNQITARGAKCLADALQDNTSIKEICLNGNPINQEEAKAFENEKRLIYF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcagcctggtggtgatgcagaaattatacaccaaacagctacaacagtctgt
ccaccatcctttgttaacctgctgaaagtacacagggaactgttagttggcaaagttcgt
aatacccaatgtttgattgacaatttgctcaagaatgagtatttctcaattgaagatgca
gagattgccgcacaatatccaacccaagctgacaaggttcgtaaaattttggatctagcc
cagagcaaaggagaagaagttgcagaatattgcatctatgtcctgcagcaagtcgctgat
gcttactacgagctgcatccatggctggaagagattggatttcatccttcagaggtcatt
ggtaataaacctgtggaaaatactgacccagtcagcaggtaccatcagaaacttaaagat
gaattgggccgaaatacaaagttcattttgtcatatgcccaaaaggaggacatgttgctt
gaagaaacttattctgccagtattatggagtttatcaaacacaacaatgagaaacttggt
gatgtgaatgtcctggaagacctggttagtgatagtgttggcttaattaatgaagatgga
gagaccatcttcatctttggggatgcagggattgggaagtccatgttgttgcaaaagatg
caaaacctctggtccaagggtgaattcaacattggggctaaattctttttccgtttccga
tgccggacattcagctattttaagcaagatgaagctatttgcttgaaagaccttttattt
aaatacaattgttttcctgaccaggatccagaagaggtctttgactttattgtgaaattc
cctcacacagttctgtttacctttgatggctttgacgagatccattctgactttgatctc
aatagcattcctgagctctgctcacccagtgaatccatccacccacttgctctgctggtg
ggtcttctcactgggaagcttctgaagggttccaggaaagtcctgacagcaagaacagga
actgagattgacaaaaacattatcaggaagaaggtgtatctccgagggttttccaccagc
aacttgaaagagtataccagaatgttcttcaaagatgaaagatgtcagaccttggttctc
aaccagctggaagcaaacccaaatctctgcagtttatgctcagtgcctttattttgctgg
attattttcaaatgttttgaccattttcactccacatttgacagccatgagctccaagac
atcacagtcaccttaacggacattttcttgctcatgactgaggtccacttgaaccggact
cagaaaacaaatttgctgaagaaaaacacaaggagccaagtggagacatacaggaccaac
aagaacattttgttttctctgagtaaaatagcacacaggggaatgcagaagtctttcttt
gtctttgaacaagatgaagttctcatcgacctctctgagcaggacttacacttgggtttc
ctcagggcaattcctgactatggaagctgcagtgatcaatcttcttatgaattcctacac
atgaccttgcaatccttttttacagctttgttcctggtcatggaggagaaagtgggtgca
aaggagttgctgcatttctttgcagaatgttctactctcgacacctctctatccaattgc
tttccaatcacctggttgaaaaatcatcgttcgacaggagaggatcctttccggaacaat
gagcactttcatttcaccaacctcttcctttgtggcttgctttccaaggcaaagcacaaa
ctgatgagacatctggttccatcagcctgcattaaaaagaaaaggagggtgcttcttgct
tatttctcagaaagcatgaagttccatgtcaagggcctcacccgagcaaggctgaaagac
tataagcagcttcaagtcaggcctaattttgtgtggatgctgaggtgcatctacgaaact
cagagtgaaaaggttggcaaagggattgtcaagaacatgcgggccaactaccttaagctg
acctactgtaatgcctattctgctgactgcacagctatctcctttgtcctgcatcatttc
cagaagcacctggcccttgacttggacaacaacaacatcaatgattatggaataaagcag
cttcttccttgttttaggaagctgacaatactgcgggtgagcgttaaccaagtaacagat
caaggaataagagtactttatgaagaattgtccaaatacaaaattgtgacttatttggga
ttgtataacaaccaaattactgatgttggagccaaatacgtggcaagactcattgaagaa
tgtccaagcctcatttatgttaaaataggagcaaacaatataacaacagaaggagggaaa
agtcttgcttatgctattcaaaagagtaaaacaatgtatgaaattggaatgtggggtaat
cagattggggatgaaggagccaaggcttttgcagaagcactgaggaatcactccacctta
acaaatgtcagtcttgcatttaatggcatcaccagagaaggaggaaaatgccttgcagaa
gctatgaaacacaacaacacagtgaacatattttggctcacaaagaatgacttggatgac
gaagcagcagagggctttggtgaaatgctaaaggtcaacaagagattggggcatctatgg
cttatccagaatcagattactgctagaggagccaaatgtctagctgacgctctccaggac
aatacatctattaaagaaatctgcttgaacggaaatccaataaaccaagaggaggcgaaa
gcctttgaaaatgaaaagaggctcatttacttttga
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integrated database retrieval system
