KEGG   Sceloporus undulatus (fence lizard): 121933600
Entry
121933600         CDS       T07740                                 
Symbol
EIF4A1
Name
(RefSeq) eukaryotic initiation factor 4A-I
  KO
K03257  translation initiation factor 4A
Organism
sund  Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:sund00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sund03019]
    121933600 (EIF4A1)
   03012 Translation factors [BR:sund03012]
    121933600 (EIF4A1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sund04147]
    121933600 (EIF4A1)
Messenger RNA biogenesis [BR:sund03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     121933600 (EIF4A1)
   mRNA cycle factors
    Stress granule specific factors
     121933600 (EIF4A1)
Translation factors [BR:sund03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    121933600 (EIF4A1)
Exosome [BR:sund04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121933600 (EIF4A1)
  Exosomal proteins of bladder cancer cells
   121933600 (EIF4A1)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 Flavi_DEAD UvrD-helicase Helicase_RecD
Other DBs
NCBI-GeneID: 121933600
NCBI-ProteinID: XP_042329503
LinkDB
Position
6:118330658..118342930
AA seq 406 aa
MSASQESRSRDNGPEGMDPDGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVV
MALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFV
LDEADEMLSRGFKDQIYDIFQKLSGNTQVVLLSATMPMDVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgtctgcgagtcaagagagccgatctagagacaatggccctgaaggaatggaccccgat
ggtgtcattgagagcaattggaacgagatcgtggacagctttgatgacatgaacctgtcg
gagtctcttctgagaggaatctatgcttatggttttgagaaaccctctgccatccagcaa
cgagccattctcccttgtatcaagggttatgatgtgattgcccaagcccagtctggaact
ggaaagaccgccacttttgccatctccatcctgcagcaaattgagctggacctgaaagcc
acccaggcgctggtactggctccaacaagagagttagcccagcagattcagaaagtggtg
atggccctgggagactacatgggtgcatcctgccatgcctgtataggagggacaaacgtc
cgcgccgaagtccagaagctgcaaatggaagcaccccatatcattgtggggactcctggg
cgggtcttcgacatgttgaataggagatatctgtcacccaagtatatcaagatgttcgtg
ctggatgaagccgatgaaatgttgagccgtggtttcaaggaccagatctacgatatattc
cagaaactaagtggaaacacacaggtggtgctcttgtctgccactatgcccatggatgtc
ctggaggtgaccaagaagttcatgagggaccccatccgtatcctggtgaagaaagaagag
ctgaccctggagggtattaggcaattctacatcaatgtggagagagaggagtggaagctg
gacaccttgtgtgacctttacgagaccctcaccatcactcaagctgtcattttcatcaat
acccgaaggaaggtggactggctcactgagaagatgcatgcccgggacttcactgtttcg
gccatgcatggggacatggaccagaaggagcgtgacgtcatcatgagggagttccgctcc
ggttccagccgtgtcctgatcaccacagacttgctggctcgtggcatcgatgtgcaacaa
gtctccctggttatcaactatgatctgcccaccaaccgtgagaactatatccacaggatc
ggtcggggtggccgctttggaaggaaaggggtggccatcaacatggtgacggaagaagac
aagcgcaccctgcgcgacatcgagacgttctacaacacctccatcgaggagatgcctctc
aacgtggccgacctcatctga

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