Sceloporus undulatus (fence lizard): 121933875
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Entry
121933875 CDS
T07740
Symbol
RPGRIP1
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
KO
K16550
protein fantom
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sund01009
]
121933875 (RPGRIP1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sund03037
]
121933875 (RPGRIP1)
Protein phosphatases and associated proteins [BR:
sund01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121933875 (RPGRIP1)
Cilium and associated proteins [BR:
sund03037
]
Primary cilia and associated proteins
MKS complex
121933875 (RPGRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
C2
Motif
Other DBs
NCBI-GeneID:
121933875
NCBI-ProteinID:
XP_042329802
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All DBs
Position
6:112977636..113011977
Genome browser
AA seq
1329 aa
AA seq
DB search
MSLLLLDETAGDLPVRDTNQKPSVITAIQDVSSAVLPVRSHGPKSLMKGSVSLARTRRQI
TRISRTELEDGFLRLHDENLLLKEFARKQEDRIKRMGTKLSRLSHERAQVDGRPGSWVRI
SGRNLDLEEDLEQMQDRVQELERRNEGLRNRLLFYKQQLQLQSCGRHCPYGYVAPRVNTG
LRRAHTAAGRVQERLRKGMRMQGPVVARSTHTAPPRYGDHVLEGSRAEMERLSHHSLVLA
ELEREQESLSSTHGKETDPESTHSQHRYLEVQERRAAIQDNVELIRLQKLLRAKNSELVI
TKAQFATLQEAYETQLHQNQEALRSTSGALLAQVEELNTLLKEETQKVTTLESQLEILSP
LQGTLKDFQERVRDLETERDLLKMDYDKLLESCMTAAQQNLDEVPQKDNSPGLEEQLRSV
TAEKKNLEEQLEKAIARNDELKQEVHLLVTRAQEVNSSQEKPAILEVPAREEKPCSSHIQ
PLYLEEKKEIEIQTVKEEIFSQQSLKRKLHETEAAHAETVLELEKTRDMLILQHRINRDY
QAELDSVLLQSTREKQEHEEKQEQMARLLDLRISRIRQLEEQLKDVAYGTRAVPFRVDEV
DTSVGADNDKVPQLKHGENLLELHISGAVLSAEALRLLGDPEPVTFCTYSFYDFETHCTP
VVRGIRPQYNFTSQYVVRVEPFFLQYLQEATCRLDLHLTSAMDHTNLASCWLRFGQALGT
GEQVHATAVLRGANGEDYGLLEYWVRLRFPIEQILRLHRQRTKALGYLSAGVPRSTVAQL
NWQEEGAKSAVQNEVHVRIEGCTGLRSRWLGSQPSPYVMYQFFNFPDHDTIIIPSSNNPH
FGDLQTFALHVTPELHHYLLVDSLWMYVFDDEDEEPSSYLGKAQIPLLPLANGRSISGDF
VLIDPADRPNGSIRLSLEWIRPYVPPEEVGSLAPMDWECHQRPLGLQIKEEQARLRNQVP
RENGAGHLPSSRQRKKPRLSLPEAEKQALKHTKLENGPKIPHVQVKPAVKSMRPMTKKKV
EEAAQEVVLEEIREEEEEVLAVEEVAAAESHRGSEAKSSTEAEAGVQKESGIVCNQLCQS
RTSRQLLCKRKRKWRGIHVLPAYTPPVSLPPPPLSLFLPAASEEPESASSDAQTTESDEV
VVALSSLQEPLEIEAPDRIRVEILSLSLLPESQPVEDERIQQLYVEYRFPGVPLEETETP
FSLRKPHGNQEIYFHFSKVIRLDPDSASLQRQLLFSMLEAEEPERNQLQFVVVSEPLPGA
GGECEEVGFAYLDLREILLTGCDVLERELWVVSSFDPEMYVGKLKVSIEAAAALRTVYWA
AKRKKSDEG
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcttctgttggatgaaacagccggggatcttccagtccgagatactaaccag
aagccttcagtgataacagctatacaagatgtatcatctgctgtactccctgtaagatcc
catgggccgaaatccttaatgaaaggatctgtctcactggcaaggacacggcgacagata
acccgaataagccgcacagagctggaagatggatttctacgacttcatgatgaaaatttg
ctgctcaaagagtttgcccggaagcaagaagacaggatcaaaaggatgggcaccaagctt
tcgagactcagccatgagcgagcccaagtggatgggagacctgggagctgggtccgcatc
tctggacggaatctagacctggaggaggacttggaacagatgcaggaccgggttcaggag
ctggagagacgcaatgagggactgaggaaccgcctcctcttctacaagcagcaactacag
ctgcaaagctgtggccggcattgcccttatggctatgtcgctcccagggtcaacacggga
cttcgacgggcacacactgctgcagggcgagtgcaggagagacttcgcaaaggaatgcgg
atgcaaggacctgtggtggccagatcaacacacacagctccaccaagatatggggatcat
gttttggagggatcccgagcagagatggagagactaagccaccatagcctggtgctggca
gaactggaacgagagcaggagtcattgagttccacacacggcaaagaaacagacccagag
agcacccactctcagcatcgttacctggaggttcaggaacgtcgagccgccatccaggac
aacgtggagctgatccggcttcagaagcttttaagggcaaagaattcagaactagtgata
accaaagcccagtttgccactttgcaggaagcttatgagactcagctccatcagaaccaa
gaggcattaaggtcaacaagtggggctttattggctcaggttgaagagctcaacactctc
ctgaaggaggagacccagaaggtcactacactggagagtcagctggaaatcctttctccc
ttgcaggggacactgaaagattttcaggagcgagtccgggacctggagacagaacgtgat
ttgctgaagatggattacgacaaactcctggagagctgcatgactgctgcccagcaaaac
ctggatgaggtgccccagaaggacaacagccctggcctggaggagcaactcagatcagtg
actgcagagaagaaaaaccttgaggaacagctagaaaaggcaatagcgcggaatgatgaa
ctgaagcaagaagtgcatctgctggtgacacgtgcgcaggaagtaaactcctcacaggag
aagccagccattctggaagtccctgcaagagaagagaaaccttgttccagtcacatccag
cctttgtacctggaggagaagaaagagatagagatacagacagtgaaggaagagatattt
agccagcagagtctaaagcgaaaactccacgagacagaggctgcccatgctgagactgtc
ctagagctagagaagacccgggatatgctcattctgcaacatcgcatcaaccgggactac
caggcggagctggacagtgtgttgctgcaaagcaccagagagaagcaggagcatgaggag
aagcaagagcagatggctcggcttctggacctacgtatctcccgcatccgccaactggaa
gagcagctgaaggatgtggcctatggaaccagggctgtcccatttcgagtagatgaagtt
gatacatccgtgggggccgacaatgacaaggtcccacaactgaagcatggagagaacctc
cttgagctgcacatctctggcgctgtgctctctgctgaggcgctgcgtctcctgggagac
ccagagcctgtcaccttctgcacatattccttctatgactttgagactcactgcacccct
gtggtgcggggcatccggccccagtataacttcacatcccaatatgttgtccgagtggag
cctttcttcctgcaatacctgcaagaggccacttgtcgccttgatctccacctcacctct
gccatggaccataccaacctggcctcctgctggctgcgttttggacaagccctgggcact
ggagaacaagtccatgccaccgcagtgcttcgtggtgccaatggtgaggattacggcctt
ctggaatactgggtgaggctccgctttcctatagaacagatcctgaggctgcaccgccaa
cgaaccaaagctttgggttacctatctgctggagtaccccgttccaccgtggcccagttg
aactggcaagaggaaggggccaagagtgcagtccagaatgaggtccatgtgcggatcgaa
ggatgcactggcttacgtagtcgttggcttgggtcacaacccagcccatacgtcatgtac
cagttcttcaattttccagaccatgacacgatcatcattccttcaagcaacaacccacac
tttggcgacctgcaaacatttgctttgcatgtcacacctgaactacatcattacttgctt
gtggacagcctatggatgtatgtatttgatgatgaggatgaggaaccgagcagctacctg
ggcaaagcccagatcccacttctgccgctagcaaatggacgcagcatctcaggagacttt
gtcctcatcgacccagcagacagacctaacggttccatccgcctgagtctggagtggatc
cgtccttatgtgcccccagaagaggttggctcacttgcacccatggattgggagtgccac
cagcggcctttggggctgcagatcaaggaggaacaagccagactgagaaaccaggtgcca
agagaaaatggtgcaggccatttgccttccagccgccaaaggaaaaagccacggctcagc
ctgcctgaggcagagaaacaagctctgaaacacaccaaactagaaaatggacccaagatc
ccacatgtccaagtgaagcctgcagtgaagtccatgagaccaatgacaaagaagaaggtg
gaggaagctgctcaggaggtggtgctggaagagataagagaggaggaagaagaagtcctg
gctgttgaagaggtggctgctgcagaaagtcaccggggatcagaggcgaaatcaagcaca
gaggcggaagctggcgtgcaaaaggaatctggtattgtgtgcaaccagctgtgtcagtca
aggactagcaggcaattactttgtaaaagaaaaaggaaatggagaggaatacatgtgcta
ccagcatacactccacctgtctctttgccccccccccccctctctctgttcttgcctgca
gcctcagaggaacctgagagtgccagcagtgatgcccagactacagagagcgatgaagtg
gtggtggccttatcaagcctgcaagagcctctagaaattgaggctcctgacagaattcgt
gtggagatcctctccctgagtctactcccagagagccagcctgttgaggatgagcgcatc
caacagctctatgtggagtatcgattccctggagtgccgctggaggagacagagacccct
ttctctttgcggaagccacacgggaatcaggaaatctacttccatttcagcaaagtgatc
agactggacccagattctgcaagtctccaaaggcagctgctgttctccatgctggaagca
gaggaaccagagaggaaccaactgcagtttgtagtggtgagtgagccactgcctggtgct
ggaggagagtgcgaggaggtgggctttgcatacctggatttgcgagagatccttctcact
ggatgtgatgtgctggaaagagagctttgggtggttagttcttttgatccggagatgtac
gttgggaagctgaaagtttccatagaagcagctgctgccctgcgtaccgtctactgggca
gccaagaggaagaagagtgacgaaggataa
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