Sceloporus undulatus (fence lizard): 121933991
Help
Entry
121933991 CDS
T07740
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1
KO
K06491
neural cell adhesion molecule
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sund04514
Cell adhesion molecule (CAM) interaction
sund04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121933991 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121933991 (NCAM1)
04517 IgSF CAM signaling
121933991 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121933991 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121933991 (NCAM1)
04090 CD molecules [BR:
sund04090
]
121933991 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
sund00536
]
121933991 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sund00537
]
121933991 (NCAM1)
04091 Lectins [BR:
sund04091
]
121933991 (NCAM1)
Membrane trafficking [BR:
sund04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
121933991 (NCAM1)
Cell adhesion molecules [BR:
sund04515
]
Immunoglobulin superfamily
NCAM1/2
121933991 (NCAM1)
CD molecules [BR:
sund04090
]
Proteins
121933991 (NCAM1)
Glycosaminoglycan binding proteins [BR:
sund00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
121933991 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sund00537
]
Others
121933991 (NCAM1)
Lectins [BR:
sund04091
]
I-type lectins (Siglecs)
121933991 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_6
Izumo-Ig
C2-set_3
V-set_CD47
Zwei_Ig_N
Adeno_E3_CR1
Ig_PDGFR_d4
C1-set
C2-set
Egh16-like
MBD
Motif
Other DBs
NCBI-GeneID:
121933991
NCBI-ProteinID:
XP_042329903
LinkDB
All DBs
Position
6:complement(132658712..132731215)
Genome browser
AA seq
1120 aa
AA seq
DB search
MSRNAIESCPSSSPMFISAANVAVPALQVNIAPNKVEVPVGESKFFLCQVTGDAKSKDIS
WFAPNGEKLSTNQQHISVVRSEDSSTLTIYNVNIDDAGIYKCVVSSEEEEVEATLNVKIF
QKLTFKNAPSPQEFKEGEDAVIMCDVVSSLPPTIMWKHMGRDVVLKKDVRFVVLSNNYLQ
IRGIKKTDEGMYRCEGRILARGEVDFRDIRVIVNVPPTVRSRQGTVNATANLSQSVKLVC
DAEGFPEPTISWTKDGESIERGEDDEKYGFSYDGSELTIRKVEKNDEAEYVCIAENKAGE
HDATIHLKVFAKPKITYVENKTAMELDDQITLTCEASGDPIPSITWRTSTRNISNEEKAS
WTRPEKQETLDGRIVVRSHARVSSLTLKDIQYTDAGEYVCIASNTIGQDSQAMYLEVQYA
PKLQGPVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIRIYNTPTASYLE
VTPDSENDFGNYNCTAVNRIGQESSEFILVQADTPSAPSIERVEPYSSTALVEFDEPEAT
GGVPILRYRAEWRARGEEDWHARMYDAKEANMEGVFTVMGLKPETLYAIRLSAINGKGAG
EMSALSEFKTQPVREPSAPKLEGQVGEDGNSIKVNLIKQDDGGSPIRHYLIRYRVKHSSE
WRPEIRLPSGSDHIMLKSLDWNAEYEVSVTAENQQGRSKAAYYTFRTSAQPTIIPASTSP
TSGLGTAAIVGILIVIFVLLLVAVDVTCYFLNKCGLLMCIAINLCGKSGPGVKGKDMEEG
KAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEHPADATAATEDMMPSV
TTVTTNSDTITETFATAQNSPTSETTTLTSSITLPATPMPDSNSVAPGQGTPSKAAVASS
SPPSSSTPAPKVAPLVDLSDTPTSTPSSGNMSSGVLSNQGGVLSPSSSAKTSEAPKGSVA
SSKSPAPPPPHPASSPASSDPKQEALASKSPEKDASQTNVVKSPTEAAKNGANQKGESAT
ANPTHNEDFKMDEGSFKTPDIDLAKDVFAALGTAAPATAPGGQATSSAPETSTSPAPAKT
EKTPVEEKPAIQATEAKTAPAEVKTVPNEATQTNDNESKA
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtaacgccattgagtcatgcccttccagttctcccatgttcatctccgcagcc
aacgttgctgtacctgctctccaggtgaacattgctccaaataaggtggaagtgcctgtt
ggagagtccaaattcttcttgtgtcaagtgactggtgatgccaaatccaaagacatctct
tggtttgcccccaatggagagaaactgtcgacaaaccagcagcacatctcagtggtgcga
tcggaagattcgtccacactcaccatctacaatgtcaacatagatgatgccggcatctac
aagtgtgttgtctccagcgaggaggaggaggtcgaggctacgttgaatgtgaagatcttc
cagaagctgaccttcaagaatgcccctagcccacaggagttcaaagaaggagaggatgcg
gttatcatgtgcgacgtggtttcctcgttgcctcctaccatcatgtggaagcacatgggc
agggatgttgtccttaaaaaagatgtgcgatttgttgtgctgtccaacaactacctgcaa
atcagagggatcaagaaaacagacgaggggatgtaccgctgcgaagggaggattttggcc
cgtggcgaggttgatttcagagatatccgggtcattgtgaatgtgcctcctacggtccgc
tccaggcagggcaccgtgaatgcaacagccaacctcagccagtcggtcaagttggtgtgt
gatgccgagggctttccagaaccaaccatcagctggaccaaggatggggaatcaatagaa
agaggggaagatgatgaaaagtacggcttcagttacgatggttcagagctgactatccgc
aaggtggagaagaatgatgaggccgagtacgtctgcatcgctgaaaacaaggctggtgag
cacgacgccactatacacctcaaagtttttgcaaaacccaagatcacctatgtggagaac
aaaacagcaatggagctggatgaccagattaccttaacctgtgaggcttctggggatccc
atcccctccatcacttggaggacctctacccgcaacatcagcaatgaagagaaggcttcg
tggacccggccggagaaacaagagactctggatgggcgcatcgttgtgcgcagccatgcg
cgcgtgtcttccctgacactcaaagacatccagtacacagacgccggggagtacgtctgc
atcgccagcaacactatagggcaagattcccaagccatgtacctggaagttcagtatgcc
ccaaagttgcagggccctgttgcagtttatacctgggaaggcaaccaggtgaacatcact
tgcgaggtctttgcctaccccagtgctgtcatctcctggttccgggatggacaactgctc
ccaagctccaactacagcaacattcggatctataacacacccacagccagttacctggag
gtaacaccggactccgaaaacgattttgggaattacaactgcacagcggtcaaccggatt
ggccaagagtcttcggagttcatccttgtgcaagcagatacgccatctgctccttccatc
gagagagtggagccctactccagcactgccttggtggagtttgatgaacccgaggccaca
ggaggcgtgcccatcctccggtacagggcagagtggcgagcgcggggggaagaggactgg
cacgccaggatgtacgatgccaaggaagctaacatggagggtgtattcaccgttatgggc
ctgaagccggagacactctacgcaatccgactgtctgccatcaacggcaaaggcgcggga
gagatgagcgctctttccgagttcaagacgcagccagttcgtgaaccaagcgcgcccaag
ttggaaggccaggtgggagaagacggcaactccatcaaggtgaacctcatcaagcaagac
gacggaggctcccctattcggcattacctcatcagataccgagttaagcattcctctgag
tggaggcccgaaattcggctcccttctggcagtgaccacatcatgctcaagtctcttgac
tggaacgccgagtatgaggtctccgtgacagcggaaaaccagcaggggagatccaaggct
gcctattacaccttcaggacttctgcgcagcccaccatcatcccagccagcacaagcccg
acgtcaggactgggcactgccgccatcgtgggcatcctcattgtcatctttgtccttctg
ctggtggctgtggatgtcacctgctacttcttgaacaagtgcggcctcttgatgtgcatt
gccatcaacctgtgtgggaaatccggtcctggtgtgaagggaaaagacatggaagagggc
aaggcagccttctcgaaagatgaatcaaaagagcctattgtggaggtgcgaacagaggaa
gagcggaccccgaaccatgatggaggcaaacacacggaacccaatgaaaccacgccgcta
acagagccagagcacccagccgatgccacagcagcaaccgaagacatgatgccctccgtc
accactgtcaccacaaactctgacacgatcactgagacctttgccactgctcagaatagc
cccaccagtgagaccaccaccctcacctccagcatcaccttgccagctacgcccatgcca
gactccaattccgtggcccccggccagggcacaccctcaaaagcggctgtggcatcctct
tcgcccccatcctcatccacccctgcccccaaagtagctcccctggttgacctcagtgac
acccctacttctactccctcctccggcaacatgtcatccggcgtcctttccaaccaaggg
ggggttctgagtcccagctcctctgccaaaacctcagaggcccccaagggctccgttgca
tccagcaaatcccccgccccacctcccccacatccagctagctctccggcttcctcggat
cccaagcaagaggctttggcctccaaaagtcccgaaaaggatgcctcacagaccaacgtg
gtgaagagtccgacagaggcggctaagaacggtgccaaccagaagggagaatctgccact
gcgaaccccactcataacgaggactttaaaatggacgaagggagcttcaagacaccagac
attgaccttgccaaggatgtttttgctgcgttgggcacagcggcccctgccacggctccc
ggaggccaggctacatcttctgctccagagacgtccacatcgccagcacctgcaaagaca
gagaaaaccccagtagaagaaaagcctgcaatccaagccacagaagccaagacagccccg
gcggaagtcaagacggtgcccaacgaagccacgcaaacaaatgacaacgaaagcaaagca
tga
DBGET
integrated database retrieval system
