KEGG   Sceloporus undulatus (fence lizard): 121934366
Entry
121934366         CDS       T07740                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sund00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121934366 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sund03019]
    121934366 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sund04812]
    121934366 (VIM)
   04147 Exosome [BR:sund04147]
    121934366 (VIM)
Messenger RNA biogenesis [BR:sund03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     121934366 (VIM)
Cytoskeleton proteins [BR:sund04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     121934366 (VIM)
Exosome [BR:sund04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121934366 (VIM)
  Exosomal proteins of other cancer cells
   121934366 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri DUF4515 Sec10_N
Other DBs
NCBI-GeneID: 121934366
NCBI-ProteinID: XP_042330720
LinkDB
Position
6:complement(27079829..27100670)
AA seq 465 aa
MSTTTSSRNSSYRRMFGGSSRPSTGSTRYVTTSSSRYSLGSALRPSSVRLVSASSPGGGI
YSSKSVRLRSSLPPMRLLGGEAAGVDFSLADAINTEFKANRTNEKAELQELNDRFANYID
KVRFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLA
DDILRLREKLQDEMLQREEAENSLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHD
EEIRELQAQIQDQHIQIDMDVAKPDLTAALRDVRQQYESVATKNLQEAEEWYKSKFADLS
EAASRNNDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEDNFALEAANYQ
DTINRLQDEIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPIPTFA
SLNLRETNLESIPVDTHSKRTLLIKTVETRDGQVINETSHHDDLE
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgagtaccaccaccagcagccgcaactcctcgtatcggcgcatgttcggaggcagcagc
cgtcccagcacgggcagcacccgctatgtcaccacttcgtccagccgctactccctgggc
agcgccctccggcccagcagcgtccgcttggtctcggcttcctcgcccggaggaggcatc
tactcctccaagtcggtgaggctccgctccagcttgcccccgatgcggctcctgggggga
gaggccgccggggtggacttctccttggccgacgccatcaacacggagttcaaggccaac
cggaccaacgagaaagccgagctgcaggagctcaacgaccgcttcgccaactacatcgac
aaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctggagcagctgaag
ggcaagggcacctcccgcctgggcgacctctacgaggaggagatgcgcgagctccggagg
caggtggaccagctcaccaacgacaaggcccgcgtcgaggtcgagagggacaacctggcc
gacgacatcctccgcctccgcgagaaacttcaagatgagatgcttcagagagaagaagct
gaaaactctttgcaatcttttagacaggatgttgacaatgcctccttggcccgcctggat
cttgaacgcaaagttgaatccctgcaagaagagattgtcttcctgaagaaacttcatgat
gaggaaattcgtgagctgcaggcccaaattcaagatcagcatatccagattgatatggat
gttgccaagcctgatctcactgctgccctgcgtgatgtccgccaacagtatgaaagcgtt
gctaccaagaaccttcaagaagctgaagagtggtacaagtccaaatttgcagatctgtct
gaagcagcaagcaggaataatgatgccttgcgtcaagccaaacaagaagctaatgaatac
cgcaggcaaatccagtctctcacctgtgaagtggatgcacttaaaggatctaatgaatcc
ctggaacgccagatgcgtgaaatggaagataactttgcccttgaagctgctaactaccaa
gacactattaatcgtctccaggacgaaattcagaacatgaaggaagaaatggctcgccat
cttcgcgagtaccaagaattgctgaatgtaaagatggctcttgatattgagattgccact
tacaggaaactgctggaaggagaagagagcagaatttctgtgcctattccaacttttgct
tccctgaatctgagggaaacaaaccttgagtccatcccagtggatacccactcaaagaga
acactccttatcaagactgttgaaactagagatggacaagttatcaatgaaacttctcac
catgatgatctggagtga

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