Sceloporus undulatus (fence lizard): 121934366
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Entry
121934366 CDS
T07740
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121934366 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121934366 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sund04812
]
121934366 (VIM)
04147 Exosome [BR:
sund04147
]
121934366 (VIM)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
121934366 (VIM)
Cytoskeleton proteins [BR:
sund04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
121934366 (VIM)
Exosome [BR:
sund04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121934366 (VIM)
Exosomal proteins of other cancer cells
121934366 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF4515
Sec10_N
Motif
Other DBs
NCBI-GeneID:
121934366
NCBI-ProteinID:
XP_042330720
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All DBs
Position
6:complement(27079829..27100670)
Genome browser
AA seq
465 aa
AA seq
DB search
MSTTTSSRNSSYRRMFGGSSRPSTGSTRYVTTSSSRYSLGSALRPSSVRLVSASSPGGGI
YSSKSVRLRSSLPPMRLLGGEAAGVDFSLADAINTEFKANRTNEKAELQELNDRFANYID
KVRFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLA
DDILRLREKLQDEMLQREEAENSLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHD
EEIRELQAQIQDQHIQIDMDVAKPDLTAALRDVRQQYESVATKNLQEAEEWYKSKFADLS
EAASRNNDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEDNFALEAANYQ
DTINRLQDEIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPIPTFA
SLNLRETNLESIPVDTHSKRTLLIKTVETRDGQVINETSHHDDLE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaccaccagcagccgcaactcctcgtatcggcgcatgttcggaggcagcagc
cgtcccagcacgggcagcacccgctatgtcaccacttcgtccagccgctactccctgggc
agcgccctccggcccagcagcgtccgcttggtctcggcttcctcgcccggaggaggcatc
tactcctccaagtcggtgaggctccgctccagcttgcccccgatgcggctcctgggggga
gaggccgccggggtggacttctccttggccgacgccatcaacacggagttcaaggccaac
cggaccaacgagaaagccgagctgcaggagctcaacgaccgcttcgccaactacatcgac
aaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctggagcagctgaag
ggcaagggcacctcccgcctgggcgacctctacgaggaggagatgcgcgagctccggagg
caggtggaccagctcaccaacgacaaggcccgcgtcgaggtcgagagggacaacctggcc
gacgacatcctccgcctccgcgagaaacttcaagatgagatgcttcagagagaagaagct
gaaaactctttgcaatcttttagacaggatgttgacaatgcctccttggcccgcctggat
cttgaacgcaaagttgaatccctgcaagaagagattgtcttcctgaagaaacttcatgat
gaggaaattcgtgagctgcaggcccaaattcaagatcagcatatccagattgatatggat
gttgccaagcctgatctcactgctgccctgcgtgatgtccgccaacagtatgaaagcgtt
gctaccaagaaccttcaagaagctgaagagtggtacaagtccaaatttgcagatctgtct
gaagcagcaagcaggaataatgatgccttgcgtcaagccaaacaagaagctaatgaatac
cgcaggcaaatccagtctctcacctgtgaagtggatgcacttaaaggatctaatgaatcc
ctggaacgccagatgcgtgaaatggaagataactttgcccttgaagctgctaactaccaa
gacactattaatcgtctccaggacgaaattcagaacatgaaggaagaaatggctcgccat
cttcgcgagtaccaagaattgctgaatgtaaagatggctcttgatattgagattgccact
tacaggaaactgctggaaggagaagagagcagaatttctgtgcctattccaacttttgct
tccctgaatctgagggaaacaaaccttgagtccatcccagtggatacccactcaaagaga
acactccttatcaagactgttgaaactagagatggacaagttatcaatgaaacttctcac
catgatgatctggagtga
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