Sceloporus undulatus (fence lizard): 121934368
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Entry
121934368 CDS
T07740
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121934368 (VPS50)
Membrane trafficking [BR:
sund04131
]
Protein recycling
Others
EARP complex
121934368 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
DcpS_C
ERp29
Motif
Other DBs
NCBI-GeneID:
121934368
NCBI-ProteinID:
XP_042330723
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All DBs
Position
6:30953581..31022186
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AA seq
726 aa
AA seq
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MQKIKSLMTRQGLKSPQESIHDLSPLENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKHELEKLPPVLSLQELEENRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTSLQLAAVICTNGRRHLNVAKEGFTQASLGLLANQRKRQLLMGLLKSLRTIKTL
QQTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKYDCGESPPSSDG
SNVMGAEETAFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSSFSI
LQLHEFKFMAQSRSPSVSPSKQPTSEIERTITLFEQYCNGGNPFEIPANSKDDETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSISRETLRSRKRSDYCLS
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYMYAIYTFFGRNDTF
ESTGLGLSSSRLRTTLNRIQESLIDLVCYGTLLEFWIVKEYDKPAQHLLLHHTLSPSCFQ
VYLCKL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtccctcatgactcgccagggtctcaaaagtcctcaggagagtatt
catgatttgagcccccttgagaacttcaggattccaagcaaggaggaacttagagaacta
cgggaacaaccgactgatcctcaggcacagcaagaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaagcatgaattggagaaactgcctcctgtt
cttagtctacaagaactggaagagaacagagacaaactaaagcagcagcaagccgctgta
tctaaaaaagttgcagacttgatacttgagaaacagcctgcatatgtcaaggaacttgaa
cgagttacatccttgcagactagccttcagctagccgctgtcatctgcacaaatggaaga
aggcatttgaatgtagcaaaagaaggttttactcaagccagtttggggcttcttgcaaat
cagcgaaaacgacagttgctgatgggactgttgaaatctctgagaacaataaaaaccctg
caacaaactgacgtacgcttaagtgaaatgttagaggaggaggattatccaggggctata
caattgtgcctcgaatgccagaaagcagctagcactttcaaacactacagttgcataagt
gaattgaattcaaaattgcaagacactctggagcaaattgaggagcagttagatgtagcg
ctttccaaaatctgcaagaactttgacatcaaccattatactaaggtgcagcaggcttac
agactccttggaaaaacacaaacagcaatggaccaactgcatatgcactttactcaagcc
attcacaacacggttttccaagttgttcttgggtatgtagagctgtgtgcaggaaacaca
gacaccaaatttcagaaacttcagtacaaggatctctgtacgcacattacttcagacagt
tacattccttgtcttgctgacctctgcaaagccctatgggaggtaatgctcagttactat
cgaaccatggagtggcatgaaaaatatgactgtggtgaatcacctccatcttctgatgga
agcaatgttatgggtgctgaggagaccgcttttgaccgcagctatgtcaaaaagaaactg
gaacatggactatcacgaatatggcaggatgtccaactgaaagtgaagacctatttgctg
ggcaccgacatgtcaaacttcaaatatgatgacttcatctttgtcctagatattgtcagc
aggttgatgcaagttggagaggaattttgtggcagcaaatcagaggttttacaagaatcc
attagaaaacaaagtgtgaactatttcaagaactatcacagaacccgacttgaagaactg
cgaatgttcttggaaaatgagacgtgggagctttgtcctgttaagtcaagcttcagcata
ttacaacttcatgaatttaagttcatggcacagtcacgttccccttcggtatcaccaagc
aagcagcctacttcagaaatagaaagaactatcactctgtttgagcagtactgtaatggg
gggaatccctttgaaattccagccaacagcaaggatgatgagactgaagatgtcctggct
tctaatgggtatgaatcggatgaacaagagaagagtgcctatcaggagtatgacagtgat
agcgacgttcctgaagaactgaaaagagactatgttgatgagcagactggagatgctccc
gtaaaaagcatatctcgagaaaccctgaggagcaggaaacgatcagattattgtctcagt
aaagtgaatgctccaattctgaccaacactacccttaatgtcatcagacttgttggcaaa
tacatgcagatgatgaacattttgaagcccattgcatttgatgtgatccacttcatgtcc
cagctttttgactattatatgtatgcaatatatacgttttttggacggaatgacacattt
gaatcaacaggacttggcctcagcagcagtaggcttcgcaccaccctgaacagaatccaa
gagagtctgattgatctggtatgttatggaactttgttagaattttggatagtgaaggaa
tacgataaacctgctcagcatttgcttttgcaccatacactttcaccttcctgttttcag
gtttatctttgcaaattatga
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