Sceloporus undulatus (fence lizard): 121934393
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Entry
121934393 CDS
T07740
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121934393 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121934393 (USP39)
Spliceosome [BR:
sund03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
121934393 (USP39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
121934393
NCBI-ProteinID:
XP_042330776
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Position
6:complement(120363165..120370364)
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AA seq
591 aa
AA seq
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MEVTSRIPRASAMTPSACAERQSVSVAMMAVRVKRERDSRSSSGRSSLSASASGRAPKQS
GGGPSWGAAVRVKREPEEDEKPRIKQEPPDPEEEEGQLQPEEEEEEPPGASQEEVKYGRF
DPEDRRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIH
SVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIANLDKQAKLSRAY
DGTTYLPGIVGLNNIKANDYANAILQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQ
RFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSALG
GTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLQNDEYQEKMVESTFMYLTLDL
PTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIK
RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPAEGAYR
IHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDTKEETNQQGA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgacgtcacggatccctcgcgcttcggctatgacgccatcagcgtgcgccgaa
cgtcagtcggtgtctgtggcgatgatggcggtgcgggtgaagcgggagcgggattcccgc
tcgtcctccgggcggagctcgctctccgcctccgcctcgggccgcgctccgaagcagtcc
ggcggagggccttcctggggagcggcggtgagagtgaagcgggagcccgaggaggacgag
aagccccggatcaagcaggagcccccagacccggaggaggaagaagggcagctgcagccg
gaggaggaggaggaggagccccccggtgcgtcccaggaagaagtcaagtacggccgcttt
gacccggaggaccgacgcagcaggcattgtccgtacctggacacaataaacaagagcgtt
ctggactttgacttcgaaaagctgtgttctatctcgctttctcacatcaatgtctacgcc
tgtttggtctgcgggaagtatttccagggtcggggcttgaaatcccatgcctacattcac
agtgtccagttcagccaccatgtcttcctcaaccttcacaccctgaagttttactgcctg
ccagacaactatgaaatcatcgactcttccctggaggatatcacttatgttctgaagccc
accttcaccaaacagcacattgctaatttggacaagcaggccaaactgtctcgggcctat
gatggcaccacgtacctgccaggcattgtgggactgaacaacataaaagccaatgactac
gcaaatgcaattcttcaggcactctccaatgtcccacccctgcggaattattttctggag
gaggagaactacaaaaacattaagcgcccgccgggggacatcatgttcctcctggttcag
cggtttggggagctcatgaggaagctgtggaatccccgaaatttcaaagctcacgtctct
ccccacgaaatgcttcaggctgtggttctgtgcagcaagaagaacttccagatcaccaag
caaggtgatggggtggatttcctttcctggttcttgaacgccctgcactctgcccttggg
gggacaaagaagaagaaaaagaccatcgtgaccgatgttttccagggctccatgcggata
ttcaccaagaaattgccacaccccgatctgccagctgaggaaaaggagcagctgctccaa
aatgatgagtaccaagaaaagatggtggaatccacctttatgtacctcaccctggacctc
cccaccgcccctctgtacaaggatgagaaggagcagctcatcatcccccaggttccgctt
ttcaacatcctggccaagttcaatgggatcacagagaaggaatataaaacctacaaagag
aatttcctcaagcgctttcagctcaccaagttgcctccatacctcatcttctgcatcaag
aggtttaccaagaacaatttctttgtagagaaaaaccccaccattgtcaatttccccatc
acgaatgtggatctccgggagtatctttctgaggaagtgcaggctgtgcataagaacacc
acctacgacctcatcgcaaacatcgtgcatgatgggaagccagctgaaggggcctacagg
attcatgtcttgcaccatggcacaggcaagtggtacgagctgcaagatttgcaagtgacg
gacatcctcccccaaatgatcacactttcagaggcttacattcagatctggaaaagacga
gataccaaggaagagaccaaccaacaaggggcttaa
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