Sceloporus undulatus (fence lizard): 121934436
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Entry
121934436 CDS
T07740
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121934436 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sund04990
]
121934436 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
sund04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
121934436 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_CCN
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
121934436
NCBI-ProteinID:
XP_042330861
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All DBs
Position
6:149979960..150250580
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AA seq
1029 aa
AA seq
DB search
MLDNFKGSLRILSSIVVLGFQLVIPQPSIEHRKVPQRIEEQNTATEEDNAGIPGNWGSWG
PWSACSRSCSGGVMEQTRPCLPGYYYERNYRRPGQYATPERTLTHQQPPHQEEQLSPYSG
HVISAIRTSVPLHRNEEDSRASFRTGVSPGGRNDSHLSKGMSRGGRLSPSRRRSPKLERR
GRNKNPIGPGKYGYGKVPYILPLQTDTGQLPQKPRRQRQSTWDAANQQSIGVPLAQPANP
SHHHRHLYQDDHRPPSSRPQPGSGSFYQPAAPQFQTFPVAQSLFHNTDLNSRIPVSRQSV
QSQTSPHRTAVIVCTGAYKQYKLCNTNPCLENRSIREVQCASYNNKPFMGRFYEWEPFAE
VKGNQKCELNCRAVGYRFYVRQAEKVIDGTPCDQNGTSICVSGQCKTIGCDDYLGSDKVV
DKCGICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMYKSNNYLALRSRS
GRSIINGNWAIDRPGRYEGGGTMFTYKRPNEISSTAGESFLADGPTNEVLDVYMIHQQPN
PGIHYEYIIPGPNVISPQVPLHRRPGEPFNGQLDVTESVNYEEETLHRETGTHMGQPVGS
FPVLQPGRFPSHPPDNQVPAGQPPRRSREYNWKQIGTTECSATCGKGSQYPIFHCVNRNT
HEEVSESYCDTGTKPSPEEEPCNIFPCPAFWDIGEWSECSKSCGLGMQHRQVLCRQIYAN
RTLTVQPHRCNHLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGD
VVDDEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGAGVRTRSVVCMTNHISSL
PLEGCGHNRPPETTPCNNGPCLGKVEWFAASWSQCSIECGSGTQQREVLCIRKTENSFEL
LNPHECAFLERPPSQQSCYLKPCGAKWFSTEWSTCSKSCEGGFRIREVRCLSDDMSSSTK
CDPQLKPEEKEQCNTQDCVPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCLRVAN
RQSGFLGRR
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgctagacaattttaaaggctctttacggatcctgagttccatagttgtacttggattt
cagcttgtcatcccacaaccttcgatcgaacacagaaaggtgccacaaaggatagaagaa
caaaacactgccacagaagaagacaacgcaggaatcccaggcaactggggaagttggggt
ccctggtcggcttgctcaagaagctgcagcggtggagtgatggagcaaacaaggccttgc
ctcccgggatattattacgagaggaactaccgtaggcctgggcaatacgccacccccgaa
aggacccttactcaccagcagcctcctcaccaagaggagcagctcagcccttactctggg
catgtcatctctgctatccggacatcagtgcctcttcacaggaacgaggaagattcccgg
gccagcttccgaactggagtctctccagggggccgcaatgacagccatttgagcaagggg
atgtcaagaggagggaggctttctccgtctcggaggcgtagccccaaactggaaagaaga
ggcagaaataagaatcccattggacccgggaagtatggctatggaaaagtgccctatata
ttaccgctgcagactgacacgggacaattaccgcagaaaccccgaaggcagcggcagtcg
acttgggacgcagcaaaccaacagagcattggggtgcccttggctcagccagcaaaccct
tcccatcaccatagacatttgtaccaagatgaccacaggcctccttcatcccggccacaa
ccaggaagtggttcgttttaccagccggctgctccccaatttcagacctttccagtagct
caaagtttgtttcacaatacggacttgaacagccgtatccctgtgtctcgacagtcagtc
caaagccagacttctcctcataggacagccgtgattgtgtgtaccggagcctacaagcag
tacaaactctgcaacacaaacccatgcctcgagaacagaagcatcagggaagtgcagtgt
gcgtcgtacaacaacaagccttttatgggtcgattctatgagtgggaaccttttgcggaa
gtgaaaggtaatcagaaatgtgaactgaactgccgggcagtgggctaccgattctacgtg
aggcaagcagaaaaagtcatcgatgggacaccttgtgaccaaaatggcacctccatttgc
gtgtcgggacaatgcaagaccattggctgtgatgactatcttggctcagacaaagtggtg
gacaaatgtgggatctgtggaggggacaacacagcttgcaaagtggtctcaggagtcttc
aaacataccctgaccaaccttggctatcacaaaattgtggaaattccagagggggccacg
aaaatcaacatcacggagatgtacaagagcaacaactacttagcattgcggagtcgatcg
ggacggtccattatcaatgggaactgggcaattgatcgacctgggagatatgagggagga
ggaaccatgttcacctacaaacgccccaatgaaatctcaagtactgccggggagtccttt
ttagccgatggcccaaccaacgaagtcttggatgtctatatgattcatcagcagcctaat
ccaggtatacattatgagtacatcataccggggcccaatgtcattagccctcaggtgcct
cttcatagacgtccaggggagccattcaatggccagctggatgtgacggagagtgtgaat
tatgaggaagagactttgcacagggagacagggactcacatgggtcagcctgtggggagc
ttcccagttctccagcctggaagatttccttcccatccaccagacaaccaggtgcctgct
ggacagccacctcgacgcagccgggaatacaactggaagcagattggaacaaccgaatgc
agcgccacgtgtgggaaaggctcacagtatcccatcttccactgcgtaaacagaaacaca
catgaggaggtctctgagagctactgcgacactggtaccaagcccagtccagaagaagaa
ccctgcaatatcttcccttgcccagccttctgggatattggtgagtggtcagaatgcagt
aagtcctgcggccttggaatgcagcaccgccaagtcctgtgccggcagatctacgccaac
cgcaccctcacggtccagccccaccgttgcaaccacctggagaaaccggagacaacaagt
acgtgccagctgaagatctgcagcgaatggcaaattcggacagagtggacatcgtgttca
gtaccatgtggagtaggtcagcggacccgagatgtaaagtgtgtcagcaaccttggagat
gttgtcgacgatgaggaatgtaacatgaagctacgtccaaatgacattgagaattgtgac
atgggaccctgtgccaagagttggtttcttactgaatggagtgaccggtgctcagcagaa
tgtggcgcaggcgtccggacgcgttctgtcgtctgcatgaccaaccacattagcagctta
cccctcgagggctgtggacacaacagaccaccggaaacaaccccgtgcaacaacggtccc
tgtttggggaaagtggaatggtttgctgcaagctggagccagtgttcaattgagtgcggc
agtggaacccagcagagggaagtgttgtgcatcagaaagacagagaacagctttgagcta
ctgaatccccacgaatgtgcgtttttggaaaggcctcccagccagcagagctgctacctc
aagccttgcggtgccaaatggtttagcactgaatggagcacttgctccaaatcctgcgaa
ggaggtttccgcatccgagaggtgcgttgtctctccgatgacatgtcgtccagcaccaaa
tgtgatccgcaactgaagccagaggaaaaggagcaatgcaacactcaggactgcgtacct
gaaatagatgagaactgcaaggacaaatattataactgcaacgtagtggttcaagcccgg
ctctgcgtctacacctattacaagacggcatgctgtgcatcctgtttgagagtggcaaac
cgacagtcggggtttctggggcgcagataa
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integrated database retrieval system
