Sceloporus undulatus (fence lizard): 121934546
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Entry
121934546 CDS
T07740
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121934546 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121934546 (CNOT10)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121934546 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
ANAPC3
TPR_17
SRP_TPR_like
TPR_7
TPR_MalT
DUF948
DUF6058
Motif
Other DBs
NCBI-GeneID:
121934546
NCBI-ProteinID:
XP_042331064
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Position
6:52309319..52335360
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AA seq
743 aa
AA seq
DB search
MAADRGGDQGTEKHEGAGVSSGITDQEKELSNSALQAFMAGNYDSCLQHLSCLQEINKDD
YKIVLNMAVAEFCKSNQTTTDNLKQTLNQLKNQVHSAIEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAIVIGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTCQAEKALHLLAVLEKMIS
QGGNSKNGKNETGNNTSKEASNHKTESGTITEAAKSKIHQYKVRAYIQLKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGGTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGSSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSVQNIVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQELK
QENGSKVGNQLGNNESSENNESCSSKGHEGDKCVPAPPSSPLRKQELENLRCSILACSAY
VALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTD
VSLGISSNEPDQGSDKGENEAMESTGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYDK
ARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKMLSEMRKK
PVFQPTHLVQPIQMPAFTTVQRK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggaccgaggcggagatcagggaacagaaaaacatgaaggagcgggtgtctct
tctgggattacggatcaagagaaggagctgtcaaacagtgcactgcaagcatttatggct
ggaaactatgatagttgtctccaacaccttagctgcttgcaagaaataaacaaggatgac
tataaaatagttttgaatatggcagtagctgaattctgtaaaagtaatcagacaacaact
gataacttgaagcaaacacttaaccagctaaaaaaccaggttcattcagctattgaggaa
atggatggcttggatgatgttgaaaacagcatgctctattacaatcaagctgttattttg
tatcatctgcggcagtacactgaagcgatagtaattggagagaaactttaccagtttatt
gaaccttttgaggaaaagtttgcccaggcagtgtgctttctacttgtggacctgtatctg
ctcacttgccaagctgagaaagccttgcatctgcttgctgtattggaaaaaatgatttca
caaggtggcaacagtaaaaatgggaagaatgagacaggtaataacactagtaaggaagca
tccaatcacaaaactgaaagtggaaccataacggaagctgccaaatctaaaatacatcag
tacaaagttcgagcttatattcagctgaagtctcttaaagcatgcaaaagagagattaaa
tccgttatgaatacagctggaaattctgctccttctctttttctgaaaagcaactttgag
tatttaagaggcaattatcggaaagcagtaaagttgttgaacagttcaaacatagctgaa
catcctggatttatgaagacaggtgaatgcctgcgatgcatgttctggaataatcttgga
tgcatccactttgccatggggaaacacaacttaggaattttctattttaaaaaggctttg
caggaaaatgacaatgcctgtgcacagcttggaacaggtggcacagacccaggtaaaaag
ttctcaggacgaccaatgtgcacgttactgactaataagcgttatgagttgctctataat
tgtggcattcagcttctacacattgggaggcctctagctgcttttgaatgcctgatagaa
gctgtccaggtttatcactcaaaccctcgcctctggttgagaatagctgaatgctgtatt
gcggccaataaaggaagttcagaacaagaaaccaagggccttccaagcaaaaagggcatt
gtacaatccattgtaggccaaggctatcatcgtaaaatagtgctggcatctcagtctgtg
cagaacattgtttataatgacggtcagtcttcagctattcctgtagctagcatggagttt
gcagcaatatgtctaagaaatgccttgctgcttcttcctgaagaccagcaggagttaaag
caggaaaatgggtctaaagttggcaaccagttgggaaataatgagagcagtgagaacaat
gaatcttgcagtagtaaaggtcatgaaggagacaaatgtgttcctgctccaccatcttct
ccactgaggaagcaagaattagaaaatttaaggtgctctatactcgcttgcagtgcttac
gtggctctggcattgggggacaaccttatggctttgaatcatgctgataaacttcttcag
cagcccaaactgtcaggatcacttaagttccttggccatttgtatgctgcagaggctctc
atctctttagacagaatctctgatgccattactcacttgaaccctgagaatgtcactgat
gtgtccctggggatttcttcaaatgagccggatcaagggtctgataaaggagaaaacgaa
gccatggaatccactggaaagcagactccgcagtgttaccccagctctgtcacatctgca
cggacaatgatgctgttcaaccttggaagtgcctactgtctgagaagcgagtatgacaaa
gctcggaaatgtctgcaccaggctgcctcactaattcatccgaaagagatcccaccagag
gcaatcttactggcggtctatcttgaacttcaaaatggcaatacccaactggcactgcaa
atcatcaaaagaaaccagctcctgccttcggtgaaaatgctgtctgagatgcgaaagaaa
cctgtatttcaaccaactcacctggtccagcctattcagatgccggcattcaccactgtt
cagaggaagtga
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