Sceloporus undulatus (fence lizard): 121934883
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Entry
121934883 CDS
T07740
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121934883 (TRIM71)
04121 Ubiquitin system [BR:
sund04121
]
121934883 (TRIM71)
Enzymes [BR:
sund01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121934883 (TRIM71)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121934883 (TRIM71)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121934883 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_UBOX
zf-B_box_Trim66
Vgb_lyase
zf-C3HC4_3
DUF5711
PspA_IM30
DUF4094
Motif
Other DBs
NCBI-GeneID:
121934883
NCBI-ProteinID:
XP_042331727
LinkDB
All DBs
Position
6:complement(52345324..52401814)
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AA seq
893 aa
AA seq
DB search
MASFPEPDFQICPLCKEMCGSPPAPASSSSNSSSSSSQTSSSSSSSSSSASSCSSSSRRL
LVLPCLHAFCRQCLESQRALQRQQQQKHPPPPSSSSGEAALKLRCPVCDQKVVISEPSGM
DALPSSNFLLSNLLDVVVAAAAAEEHQQNNGRPPAGASVVGSSNASTNNRHHHPPHPRQQ
QPSQPGGGSSPGSAAPSGGSGGGGGGSLLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQE
HLCDNCVRAHQRVRLTKDHFIERYGPGSSAAAASSSASSSSAAAVGSAPYNLLAAFPDRV
SYCQQHDDEVLHFYCDTCSVPICRECTMERHVGHSFIYLQDALQDSRTLTIQLLADAQQG
RQAIQLSIEQAQAIAEQVEMKAKMVQSEVKAVTSRHKKALEERECELLWKVEKIRQVKAK
SLYLQVEKLRQNLNKLDNTISAVQQVLEEGRSMDILLARDRMLAQVQELKNVRGFLQPQE
DDRVMFTPPDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGE
LRRSGGDMISAVVMGPDGNLFGADIGDQQNGTYLVNYRPQMEGEHLISVMMCNQHIENSP
FKITVKSGRSYVGIGLPGLCFASEGDGDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKP
CGAFHHKFGTLGSRPGQFDRPAGVASDSSRRIIVADKDNHRIQIFTFDGQFILKFGEKGT
KNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTF
NHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTSNGQFLRPQGVAVDQEGRIIVADSRN
HRVQIFEPNGSFLCKFGTQGSGFGQMDRPSGITVTPDGMIVVVDFGNNRILVF
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttcccggagccggacttccagatctgcccgttgtgcaaggagatgtgcggc
tcccctccggcgccggcttcctcgtcctccaactcctcgtcttcctcctcgcagacctcc
agctcctcctcctcctcctcctcctcggcctcctcctgctcttcctcctcgcggcgcctg
ctggtgctgccttgcctgcacgccttctgccgccagtgcctcgagtcccagcgggccctg
cagaggcagcagcagcagaagcacccgcctccgccctcctcctcgtcgggggaggccgcc
ctgaagctgcgctgccccgtctgcgaccagaaggtggtgatctcggagccgtcgggcatg
gacgccctgccttcctccaacttcctcctcagcaacttgctcgacgtcgtggtcgccgcc
gcggccgccgaggagcaccagcagaacaacgggaggccgcccgccggggcctcggtcgtc
ggaagcagcaacgccagcaccaacaaccggcaccaccacccccctcacccccggcagcag
cagccgagccaaccgggaggaggctcctcgccaggctcggcggcgccgtcggggggaagc
ggcggcggcggcgggggctcgctgctgctccgacggccccacagccgccaaggcgagccc
cgttgcagctcctgcgacgaaggcaacgcggccagctcccgctgcctggactgccaggag
cacctctgcgacaactgcgtccgcgcccaccagagggtccgcctcaccaaggaccacttc
atcgagcgctacgggccaggctcctcggccgccgctgcctcctcctcggcctcctcttcc
tccgccgccgccgtcggctccgcgccttacaacctcctggccgccttcccggacagggtc
agctactgccagcagcacgacgacgaggtgttgcatttttactgtgacacatgctctgtc
cccatctgccgggaatgtaccatggaacgacatgtgggtcacagctttatctacctccaa
gatgctctgcaggactctagaactcttaccattcagctgctcgcggatgctcaacaggga
cgacaggccattcagctgagtatcgagcaggcccaagctatagcagaacaagttgagatg
aaggccaagatggtacaatctgaagtgaaggcagtgacatctagacacaagaaggcttta
gaagaaagagaatgtgagctgctatggaaggtggaaaaaatccgccaagtgaaagcaaag
tccctctaccttcaggttgaaaagttgcgtcaaaacctcaacaagctagacaacaccatc
agtgcagtccagcaggtcctagaggagggtcgaagcatggatatcctcttggcacgagac
cggatgcttgctcaggtccaggagctgaagaatgtcagaggcttcctacagcctcaagag
gatgacagggtcatgttcacacctcccgatcaggctttgtatatggccatcaagtccatg
gggtttgtcagcagtggggctttcgctcctctgaccaaagccactggggaaggtctcaaa
cgtgcacttcaaggcaaagtagcctctttcacagtgataggctatgaccatgatggagag
ctgcgccgttccgggggagacatgatctctgctgtagtcatggggccagatgggaatctc
tttggagcagatattggtgaccaacagaatgggacctatctggtcaattacaggccacaa
atggaaggggaacacctcatttcagtcatgatgtgcaaccagcatatagaaaatagccca
ttcaaaatcaccgtcaaatcagggcgcagctatgttggcattggactgccagggctctgt
tttgctagcgagggagatggtgatgggaagttgtgccgcccctggggcgtgagtgtagat
aaagaaggctatatcattgttgctgatcgcagtaataaccgcatccaggtctttaagcct
tgtggggctttccatcataagtttggcaccttgggctccaggcccggccaattcgatagg
cctgctggtgttgcctcagactcatcacggaggattatagtggcagacaaggacaatcat
cgcatccagatcttcacattcgatggccagttcattctgaaatttggggagaaaggaacc
aagaatgggcagttcaattacccatgggatgtagcggtaaactccgagggaaaaatcctg
gtctctgacacaaggaatcatcgggttcagctctttggccctgatggagtattcctgaat
aagtatggttttgaaggagcgctctggaagcactttgattctccaagaggtgtgacgttt
aatcacgaaggccatctagtcgtaacagatttcaacaatcatcgtctcttggtcatacat
ccagactgtcagtcagcccgcttccttgggtctgaaggcacaagcaatgggcagtttctg
cgcccgcagggtgtggcagtcgatcaggaaggccgtatcattgtggcagattccaggaac
catcgtgtgcagatatttgagccaaatggtagttttttatgcaaatttggcactcaggga
agtggctttggtcagatggaccgtccttcaggtattacagtcaccccggatggcatgatt
gttgtggttgactttggaaacaatcgaattctcgtcttctaa
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integrated database retrieval system
