Sceloporus undulatus (fence lizard): 121934965
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Entry
121934965 CDS
T07740
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121934965 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121934965 (NFRKB)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
121934965 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
121934965
NCBI-ProteinID:
XP_042331869
LinkDB
All DBs
Position
6:complement(141262514..141294627)
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AA seq
1338 aa
AA seq
DB search
MDSLDHMLTDPLELGPSGEGNGSQIMEDCMLGSIRISLPEDLLEDPEIFFEVVSLSTWQD
VLMDSQREHLKKFLPHFPENNTEHQNNLILSLFNGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLSSQQQYFYRLLKQILASRNQLLELARKGGPSLSVKRKYSAAACA
AEERDRRTHQRYLKILKEVKEECGDTTLSSDEEDLSSWIPNSPAHCPSPAVPLRVIPTLS
TQDMKTAAKMDFDENVLKLMLKKHHEKRKRQPNHPDLMTGDLTLNDIMTRVNAGRKGSLA
VLFDLAVLKKKVKEKEEKKKKKLKVVKSEAEDFSESLGNTEGMPPMSQDPSPIPPIWDSP
SLPSVKEEPLEDIKPCLGINEISSSFFSLLLEILLIEGPASLSVLEDKVMDWQSSPASTL
NSWFSFAPSWSELVLPALQFLTGDSRDGPSTASPFVEFKEKPQQWKLIGSAQEHEKELAA
LFQLWLETKDQVFFKDNDEDSSDATIPVPRVRTDYVVRPSTGEEKRVFQEQERFRYSQPH
KAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNG
EGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDTGRKLWIYLHRD
RSEEEFERIHQAQAAAAKAKKALQQKPKPPAKIKSSNKETAVKVVTSSTSEPSQLSLSDS
SMPATPVTPVTPTAPPLPAMSISPPPPPPAISVVSKSLPSVTSEQAKPNQSILLVSSPTM
PQLGTLLSTTQSTPTQTGTQQPSPRVTSHTPSSGLPQVRVVTAQSSLPPLSQSAATVTQP
PPAASVPQIRAPSTSAQTKVLSQAVMAVPVKAQTSPVQVQRPAVTGTASVVGTGISAAPS
PAPKPAASSPSSSTPNITTISLSPSTSSSSSSSSSSSSAVLQNIAGQNIIKQVAITGQLG
LKSQPGSSIPLAASNFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVK
LTQDLFTTAAAAAGSTSAGKGLSATLRVTSSPIQSSDSPAKTSSPASASPSSAGSTVVKV
TPDMKTVESTSSAFRLMPALGMTVADQKGKAITTVATTEGKPAATIRIVQGMGVMPPKAG
QTITVATHAKQMPSSSSVSMPGTVLTSAVSLPTMTASVSKAVAVVSGAAGTPLTIGTGTT
TMRQLPVSTTVVSTSQTGKLPARITVPLSVISQPVKGKSVVTAPLIKGNLGANISGLGRN
IILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTVSGSTKA
VSTVVVTAAPSPKQTQDQ
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggattccctggatcatatgctcactgacccattggagttggggccttctggagaaggc
aatggctctcaaattatggaggattgcatgctgggatccatacgcattagtctgccagag
gatctcctggaggaccctgaaatcttttttgaagttgtaagtctttcaacatggcaggat
gttctgatggattcacaacgagaacatttgaaaaagtttttgcctcatttcccagaaaac
aacacagaacaccagaataatctcattttgtctctgtttaatggagaaaacttccggttt
ggaaatcccctacacattgcccagaagctgttccgagatggacacttcaatcctgaagta
gtaaaatatcgacagctttgcttcaaatctcagtacaagcgctacctcagttcccagcag
cagtacttttaccggttgctgaaacaaattttagcctcccggaatcaactgttagagctg
gctaggaaaggtggccccagtctttctgtgaagaggaaatactcagcggctgcttgtgct
gctgaagaacgagacagacgaacacatcagcggtacctaaaaatcctcaaggaggtaaaa
gaggaatgtggagatactactttatcctctgatgaagaagatcttagttcctggatccca
aattctcctgctcattgcccaagtcctgctgttccactcagggtaataccaacattatca
actcaggatatgaaaactgcagcaaaaatggattttgatgagaatgttctgaagctgatg
ctgaagaaacaccacgaaaagcgcaagcggcagcctaaccatcctgatttaatgacaggg
gacttgactctgaatgacatcatgacacgtgtgaatgctggcaggaaaggatccttggcg
gtcttgtttgacctggctgtcctcaaaaagaaggtgaaggaaaaggaggagaaaaagaag
aaaaagctaaaagtggttaaatcagaagcagaagacttctctgagtccctgggaaacact
gaaggaatgcctccaatgtctcaagatccatcccctattcctcccatttgggattcacca
tccctcccatctgttaaagaagagcctcttgaagatatcaagccctgtcttggaataaat
gaaatttcctccagttttttctcacttcttctggagattctgcttatagaagggcctgct
agtctctcagtgcttgaggataaagttatggattggcagtcttctcctgccagcacatta
aacagctggttctcctttgcccccagctggtcagagcttgttctgcctgccctgcagttt
ctcacaggtgacagcagagatggtccttccacagcttctccatttgttgaatttaaagaa
aaacctcagcagtggaaactgataggctctgctcaagagcatgagaaggaactggcagca
ttgttccagctgtggttggagacaaaagaccaagtctttttcaaggacaatgatgaagat
agctcagatgccaccatacctgttccccgagtaaggactgactatgttgtccggcctagc
actggggaagagaaacgtgtgttccaggaacaggagcgttttcgatacagccagccccac
aaagctttcacattccgcatgcatggctttgaatcagtggttggtcctgtgaagggtgta
tttgacaaggagacatctctgaacaaagcccgagaacattctctgttgcgatcagatagg
cctgcatatgtcaccatcttgtctcttgtccgggatgctgcagcccgtcttcctaatgga
gaagggactcgtgctgagatctgtgagctgcttaaagactcccagtttcttgctcctgat
gtcaccagtgctcaggttaacactgtggtgagtggtgcactagatcgactgcattatgag
aaggatccctgtgtaaaatatgatactggacgcaaactgtggatatatcttcatcgagac
aggagtgaagaagaatttgagcggattcatcaagctcaggctgctgcagcaaaggccaaa
aaagctcttcagcaaaagcccaagcctccagctaagataaaatccagtaacaaggagacc
gcagtgaaagtggttactagtagcacctcagaaccaagccagttgagccttagtgactcc
agcatgcctgcaactcctgtgactccagtgacacccactgcccctcccttaccagcaatg
tccatttcaccacctccacctccaccagcaatctctgtggttagcaagagtttgccaagt
gttacatcagagcaagctaaacccaatcaaagcattcttttagtgtcttctcccaccatg
ccgcagcttgggacattgctctctaccacacagagtactcccacacagactgggactcag
caaccttctcctcgggtaaccagtcacacaccttcatcagggctcccacaggttcgagtg
gttacagcacagtctagtctccctcctttgtctcagtcagctgcaacagtaacacagcca
ccaccagcggcatctgtacctcagatccgtgccccttccacttctgcacaaacaaaagta
ctgtctcaggctgttatggctgtaccagtgaaagctcagaccagcccagtccaggtgcag
aggccagctgtaacaggaacagctagtgttgttggcacaggaatctctgcagcacccagt
cctgctccaaagccagcagccagttctccaagcagctctacacccaacatcacaactatt
tctttatcaccatcgacatcatcctcttcatcatcttcttcctcttcatcctctgctgtc
ctccagaacatagctggccaaaatattatcaaacaggtggctattactggacaacttggc
ttgaaaagccagcctggaagcagcatcccccttgcggcttccaacttccgcatccaaggc
aaagatgtactacgtctgcctccctcttccatcaccactgatgccaaagggcaaactgtt
ctccgcataaccccagatatgatggctactttggctaagtctcaagtcaccactgtcaaa
ctgactcaagatctcttcactactgctgctgctgctgctggaagcacttctgctgggaag
ggcctctctgccactctgcgtgtgacttccagccctatccagtcttctgactctcctgct
aagaccagcagtcctgcctctgcttccccaagctcagctgggtcaacagtggtgaaagtg
actccagacatgaagactgtggagtccaccagttccgccttcagactgatgcctgcttta
ggcatgactgtagcagaccagaagggcaaagccatcactacagtggcaaccactgaaggc
aaaccagctgccactataaggattgtacaggggatgggagtgatgccaccaaaagctggg
cagacaattacagtagccacgcatgccaagcagatgccctcttcctcttcagtgagcatg
cctggcacagtccttacttcagctgtctctttgccaaccatgactgcttcagtgtccaaa
gcagttgctgttgtgtcaggagcagcagggacacccctaaccataggaacagggaccacc
actatgcgtcagcttccagtgagcaccactgttgtatccacctcacagacaggaaaactg
cctgctcgaatcacagtgcccctgtcagtcataagccaacctgtgaaaggcaagagtgtt
gtgactgctcccctcattaagggcaatcttggggctaacatcagtggactgggtaggaat
atcattctcaccacaatgccagctgggacaaagctgatagctgggaacaagccagtgagc
tttctgactgcacagcaactacaacagttgcagcaacaaggccaggcaacacaggtgcga
attcagacagtgccagcctctcatctccaacagggaaccgtatctggttctacaaaagca
gtctccactgtagttgtgacagcagcaccatctccaaaacagacacaagatcagtag
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