Sceloporus undulatus (fence lizard): 121935038
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Entry
121935038 CDS
T07740
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121935038 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sund01007
]
121935038 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sund03016
]
121935038 (GARS1)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121935038 (GARS1)
Enzymes [BR:
sund01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
121935038 (GARS1)
Amino acid related enzymes [BR:
sund01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121935038 (GARS1)
Transfer RNA biogenesis [BR:
sund03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121935038 (GARS1)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121935038 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
DUF3993
Motif
Other DBs
NCBI-GeneID:
121935038
NCBI-ProteinID:
XP_042331997
LinkDB
All DBs
Position
6:complement(6947826..6974692)
Genome browser
AA seq
749 aa
AA seq
DB search
MPWPLSLLRAASLGRLNSIPHRPVFAFSSCCLLRPDAGRPRPRSRHRPRFSSSSSPRDPA
AFASMDGPAAEALLAPFRQAVRQQGELVRKLKDEKAPQVDVDKAVAELKARKRTLEAKEL
ALQPKDDIVDRAKMEDTLKRRFFYDQAFSIYGGVSGLYDFGPVGCTLKNNLVQAWRQHFI
QEEQILEIDCTMLTPESVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKK
CTAEKKNEMENVLTQLDNYGQEELADLFVNYNVKSPSTGNDLTPPVSFNLMFKTSIGPGG
NMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAE
IEHFVDPSEKHHPKFENVADLHILLYSSKAQTSGQSARVMRLGDAVEQGVINNSVLGYFI
GRIYLYLVKVGISPNKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLS
CHARATKVPLVAEKPLKEPRTANVVQFEANKGAIGKAYKKDAKLVLEYLSICDECYISEM
EKLLNEKGEFTVETEGKTFQLTKDMVSVKRFQKTLHVEEIVPNVIEPSFGIGRIMYTVFE
HTFRIREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRNGVSHKVDDS
SGSIGRRYARTDEIGVAFGITIDFDTVNRTPHTATLRDRDSMRQIRAEISELPTIVRDLA
NGNITWADVEAKYPSFEGQETGKKETIGE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggccccttagcctcctccgcgctgcctccctcggccgcctcaatagcatcccg
caccggcccgtcttcgccttctcctcctgctgccttctcaggcccgacgccggcaggccc
cggccccgatcgcggcacaggccccgcttctcctcctcttcgtccccgagagacccagcc
gccttcgccagcatggacggccccgctgccgaggcgctcctggctcccttcaggcaggcg
gtcaggcagcagggagaacttgttcgaaaattgaaggatgagaaggctcctcaggtggat
gtggacaaagcagtagctgaactcaaggctcggaagagaacgctagaagcaaaggaactt
gctttgcagcctaaagatgatatcgtggacagagcaaaaatggaagataccctgaagcga
agatttttctatgatcaggccttttctatttatggaggtgtgagtggcttgtatgatttt
ggtccagttggatgcactttgaagaacaacttagttcaagcctggaggcagcacttcatc
caggaagagcagattcttgagattgattgcaccatgctcacaccagaatcagttctgaaa
acctctggccatgtagacaaatttgcagatttcatggtgaaggatgttaaaaatggggag
tgttttcgagctgatcacctcctaaaagctcatttacagaagctgatgtctgacaagaaa
tgtacagctgagaaaaagaatgaaatggagaatgtgctaacgcagttggacaactatggc
caggaagagctcgcagatctgtttgtgaattacaatgtgaagtcccctagtacaggaaat
gatctcacccctcctgtatcattcaaccttatgttcaagacctctatcgggccaggcgga
aacatgccaggttatctgagaccagaaactgcgcaagggatcttcctgaacttcaaacgc
cttttggaatttaaccaaggcaagctgccttttgctgctgctcagattggaaattccttc
agaaacgagatttctccacgctcaggcctcatcagagtcagagaatttaccatggcagaa
attgagcattttgtggatcccagtgagaaacatcaccccaagtttgagaacgtagcagat
ctccacatcctcctgtattcctctaaagcccagaccagtgggcagtctgctcgtgtcatg
cgtctgggggatgctgttgagcagggtgtaatcaataactcggtgctgggttacttcatt
ggccgcatctacctctaccttgtaaaagttggcatctctccaaacaaattgcgcttccgg
caacatatggagaacgagatggctcattatgcctgtgactgctgggatgcagagtccaaa
acatcctatgggtggattgaaattgttggctgtgctgaccgctcctgctatgatctctct
tgccatgccagagctaccaaagttcctctcgtagctgagaagcctctgaaggaacccaga
acagcaaatgttgttcaatttgaagcaaataagggagcaatcggtaaggcttacaagaag
gatgccaagctggtgctggaatacctttccatctgtgatgagtgttacatcagtgagatg
gagaaactgttgaatgaaaaaggggaatttactgttgaaactgaagggaaaacttttcaa
ttaacaaaggacatggtcagtgtgaagagattccagaagaccttacatgtggaagaaata
gttcctaatgtaattgagccttcatttggtattggaagaatcatgtatacagtatttgag
cacacattccgtatccgggaaggagatgaacagcgaacgtacttcagcttcccagctgtt
gtggcgccattcaaatgctctgtccttcccttgagccaaaaccaggaattcatgccattt
gtgaaggaactatcggaagctctcacccgaaacggagtctcccacaaggtggatgactct
tctggatccattggcaggcgctatgccagaacggacgagattggtgtggcttttgggata
acaattgactttgacactgtcaacaggacaccacacacagccaccttaagggatcgcgac
tcgatgcgccagatacgagcagagatctctgagcttcctaccatagttcgggaccttgca
aatggtaacataacctgggctgatgtggaagccaagtatccatcctttgagggacaagag
actggcaaaaaggagacaataggggaataa
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