Sceloporus undulatus (fence lizard): 121935657
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Entry
121935657 CDS
T07740
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121935657 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121935657 (MYO5C)
04131 Membrane trafficking [BR:
sund04131
]
121935657 (MYO5C)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121935657 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sund04812
]
121935657 (MYO5C)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121935657 (MYO5C)
mRNA cycle factors
P-body specific factors
121935657 (MYO5C)
Membrane trafficking [BR:
sund04131
]
Others
Actin-binding proteins
Myosins
121935657 (MYO5C)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121935657 (MYO5C)
Cytoskeleton proteins [BR:
sund04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121935657 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_16
AAA_22
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121935657
NCBI-ProteinID:
XP_042333360
LinkDB
All DBs
Position
6:157448675..157508984
Genome browser
AA seq
1738 aa
AA seq
DB search
MALDDLYTQYNRVWIPDSEEVWQSAEITADYKVGDHILHLQLEDGRELDYPVDPKALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSRSTSNTQVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDKRYQIIGANMRTY
LLEKSRVVSQSENERNYHIFYQLCSSALRPEFKHLKLASAEEFNYTNMGGNTVIEGVDDR
ANMIETQRTFTLLGLKEDFQMDVFKILAAILHLGNMEIIAVGDERSSVSVNDKHLKIFCE
LLDLESDKLAKWLCHRKIVTTSETVVKPMTKLQALNARDALAKKIYAHLFDFIVERINKA
LHFIGKQHTFIGVLDIYGFETFDMNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKENI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPQGADENWLQKLYNNFINKNPLFEKPR
MSNSSFIIQHFADKVEYKSEGFLEKNRDTVYEDLIEILKNSKFQLCANFFQDNPIPISPF
SSAIQVKSAKIVIKSPNKQFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDQKLAFE
FDAKRVVQQLRACGVLETIRISSQSYPSRWTYIEFYSRYSILMSQHELSLTDKKQICKIV
LQRLIQDPSQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACIMIQKNMRGWLQRKKFLRIR
QAAVTIQQYFRGQRTVRQAITAAALKETWAAIVIQKHCRGYLVRRLCQLIRVAALTIQAF
TRGFLARKKYRKMVEEQKALVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKLED
QNKENNVLLERLTTLASNHSSDVETIQKLQLDLEKLATQKKMSEEKGKKHKDEYEQRVSK
LENHNLELQEQKKKLEKELQEKTEEMKEKMDHLTKQLFADVQKEEKQRILLEKNFHNQKQ
EYEKKIELLMAEIKSLKNENDQLQNQIREEQQIQGGLKMEAEELANQAKTIPELQKEIEL
IQMQKMDVEKQLQHQKREMRDKMSEITRQLRESYDFAGVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQRESYEREIEGLSSKVEHLSQEITHLQKLFREENDINDSIRLQ
VARLTSENMMIPDLKQQISELQKQKMNLESHLQEETANNKEKIEEMANLLHHNMEKDGTK
RRVLQVQNEIYTKEKEKLIATFQEFQETSNHMDNENETKSKIWQDVAYLTMENTDLEEEL
DKKDRLIKKLQDQIKTLRKSIETANEAPMLSTPKEYIGMLQYRNEDEAKIIQNLILELKP
RGVVVNMIPGLPAHILFMCIRYADYLNDDGMLKSFMNMTINGIKQVIKEHVEDFEMLSFW
LSNTCHFLNCLKQYSGEEEFMKHNTPQQNKNNLKHFDLSEYRQVLSDLAIRIYHQFIIVM
ENNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYTTMCQ
NGLDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQS
SSAKETLEPLSQAAWLLQVKKTTDDDAKEIYERCTSLSAVQIVKILNAYTPIDDFEKRVT
PSFVRKVQAMLSNRENSAQLMLDTKYLFQVTFPFTPSPHALEAIQIPSSFKLGFLTRI
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggccctggacgacctctacacccagtataacagagtctggatccctgatagtgaagaa
gtttggcagtctgctgaaattacagcagactataaggttggagaccacatacttcatcta
caactagaagacggcagggaattggattatccagttgaccccaaggctttgcctcctttg
cgaaatcctgacatacttgttggtgaaaatgacctcacggcacttagttatcttcatgag
cctgctgtcctacacaatctcaaagttcgttttgtggaatccagactgatctatacctac
agtggaataattttagttgcaatgaatccctacaaacagctgcctatatatggagatgcc
attattcatgcctatagtggccaaaatatgggagatatggatccacatatatttgctgtg
gcagaagaagcttacaagcagatggcaaggaacaataagaatcaatctattatagtcagt
ggagaatcaggagctgggaaaacagtttctgctagatatgctatgagatactttgcaaca
gtcagtaggtctactagcaacacgcaagtggaggataaagtgctggcatccaatcccata
acagaggctgttggtaatgctaaaaccacacgcaatgacaacagcagtcgttttggaaag
tatacagaaatcagttttgataagaggtatcagatcattggtgcaaatatgaggacctac
ttgcttgagaaatccagagttgtgtctcagtcggagaatgaaagaaattatcatatattt
tatcagttgtgctcctcagctctgagaccagaatttaaacatcttaaactggcaagtgct
gaagaatttaattatacaaacatgggtggaaacactgtgattgaaggagtggatgacaga
gcaaatatgatagaaactcaaaggacattcactcttcttggtcttaaggaagattttcag
atggatgtttttaaaatactggcagctattcttcatttaggcaacatggaaataattgct
gttggtgatgaaagatcgtctgttagtgtgaatgataaacatctcaaaatattttgtgaa
ctactggatttagaaagtgacaaactggcaaaatggttgtgccacagaaaaattgtcact
acctcagagacagtagtaaaaccaatgacaaaactccaagctcttaatgcccgtgatgct
ttggcaaagaagatctacgctcatctttttgatttcattgtggaacgaattaacaaggca
ctgcatttcattggcaaacagcacacatttattggtgtgttggacatctatggatttgaa
acttttgatatgaacagctttgaacaattttgcataaattatgccaatgaaaagctacag
cagcaatttaacctgcatgtctttaaacttgagcaagaagaatatatgaaagaaaatatc
ccatggactctaattgacttctatgacaatcaacctgtcattgatctcattgaagctaaa
atgggcattttggagctactggatgaagagtgcctgttgcctcaaggagcagatgaaaat
tggcttcagaagttatataataattttataaacaagaaccccctctttgagaaaccaaga
atgtcaaattcttcttttataatccagcactttgctgataaggtagagtacaaaagtgaa
ggatttttggaaaaaaacagagacacagtatatgaagacttgattgaaatcttgaaaaat
agcaagtttcaactatgtgcaaactttttccaagacaaccccatccctatttcaccattc
agctcagcgatccaggtcaagtctgcaaaaatagtgatcaaatcaccaaataaacagttc
cgtaccacagttggcaacaagttccgcagttccttatacttgttaatggagacgctcaat
gcaactacacctcactatgtacgatgcataaagccaaatgatcagaagttagcatttgaa
tttgatgccaaaagagtggttcagcaattgcgagcgtgcggtgttttagaaacaattagg
attagctctcagagttacccatctagatggacttacattgaattttacagccgctacagc
attctcatgtctcaacacgaactctctctaacagataagaaacaaatttgcaagatagtg
ttgcaacgactgatccaggatccaagtcagtaccagtttggcaggacaaaaatattcttc
agagcaggacaggttgcttatctggaaaagttaaggtcagataagctgaggcaagcatgt
atcatgattcaaaaaaatatgcgaggctggctgcagcgaaagaaattcctccgtatcaga
caagcagcagttacaatacaacagtacttccgaggacaacgtactgtgagacaagccata
acagcagctgccttaaaagaaacatgggcagcgattgttatccagaaacactgccgagga
tatttagtacgtagactttgccaactcatccgcgtggctgctttgacaattcaagctttt
acacgaggattcctagcaaggaagaaatacagaaagatggttgaagaacagaaggcattg
gttctgcaaaaatatgcccgagcttggcttgctagacgcagattccagaatattcgccgt
ttcgtgctgaacatccagctttcatacagggtgcaacgactgcagaaaaaactggaagac
cagaataaagagaataatgtcctgttggaaaggttgactactcttgcctcaaatcactcc
agtgatgtagaaactattcagaagcttcaactggatcttgaaaaattagccacacaaaag
aaaatgtctgaagaaaaagggaagaagcacaaggatgaatatgaacagagagtctcaaaa
cttgaaaatcacaatttagagttacaggaacagaagaaaaaactagaaaaggagcttcaa
gagaaaacggaggaaatgaaagagaaaatggatcacctaacaaaacagctcttcgctgat
gtccagaaagaagaaaaacaacgaatactgcttgagaagaacttccataaccagaaacaa
gagtacgagaaaaagattgagttgctcatggcagaaataaaatctctcaaaaatgaaaat
gaccagcttcaaaatcaaatccgggaagaacaacaaattcaaggcggcttaaaaatggaa
gcagaggaacttgcaaaccaagccaagacaattcctgaactgcaaaaagaaattgaacta
attcaaatgcaaaaaatggacgtggagaagcaactgcagcaccagaaacgtgaaatgaga
gataaaatgtcagagattacaaggcaacttcgcgagagctatgactttgcaggtgtaaga
agcagattgtctactgaagatttggaacatttaaatgaagatggggaactttggtttgca
tatgaaggtttgaaaaaagctacaagagtattagaaagccatttccagtctcagagagag
agctatgaaagggagatagaaggcctcagttctaaagtagagcatcttagtcaagaaata
acccacttacagaagctgttcagagaagagaatgacataaatgacagtatccgactccaa
gtcgccaggctgacctcagaaaacatgatgattccagatcttaaacagcagatttctgag
cttcagaagcagaaaatgaaccttgaaagccatcttcaggaggaaactgcaaataataaa
gagaaaatagaagaaatggcaaatctgttgcatcacaacatggaaaaagatggaacaaaa
aggagagtactacaagttcaaaacgaaatatacactaaggaaaaagaaaagctgatagca
acttttcaagaatttcaggagacaagcaatcacatggataatgagaatgaaaccaaaagt
aaaatatggcaggatgtagcatatcttaccatggaaaatacggatctagaggaagaactt
gataagaaggacagattaataaagaaactacaggaccagatcaagactctcaggaagtca
atagaaacagctaatgaagcacccatgctatccacaccaaaggaatacattggaatgttg
cagtacagaaatgaagatgaagcaaaaataattcagaatctgattcttgaactgaagccc
cgtggggttgtggtaaatatgataccaggcctcccagcccacattctcttcatgtgtata
agatatgcagattatctaaatgatgatggcatgctgaaatctttcatgaatatgacaatc
aatggcatcaagcaagtaattaaggaacatgttgaagactttgagatgttgtcattctgg
ctttcaaatacatgccactttctcaactgtctgaaacagtatagcggtgaagaggaattc
atgaagcataacactccacaacaaaacaagaacaatctgaagcactttgatctgtcggaa
tacaggcaggttcttagtgacctggccattaggatttatcatcaattcattattgtaatg
gagaacaatattcagccaatgatagtgccaggaatgctggagtatgaaagcctccagggg
atttcaggcttaaaaccaaccggattccgcaagcgctcttccagcatagacgacacagat
gcctacactatgacctccatcctgcaacagctcagctatttttataccacaatgtgtcag
aatggcttggactcagagcttctaaagcaggctgtgaagcagcttttctttctgatagga
gcagtcacccttaatagcctcttcctacgcaaggacatgtgctcttgtcgcaaagggatg
cagataaggtgtaacatcagctacctggaagaatggctgaaggataagaaccttcagagc
agctctgccaaagagaccttggagcctctttcccaagcagcctggctcctccaggtcaaa
aagactacagacgatgatgctaaagagatctatgaacgttgtacatctctttctgctgtt
cagatagtgaaaatcctcaacgcctacactcccatagatgactttgagaaaagagtgaca
ccatcatttgttcgtaaagtgcaggcaatgctgagcaacagagagaattctgcacaattg
atgctagatacgaaatacctctttcaagtgacatttcctttcaccccttcaccacatgct
ttggaagcaatacaaatccccagcagtttcaaacttggctttctcaccagaatataa
DBGET
integrated database retrieval system
