Sceloporus undulatus (fence lizard): 121936038
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Entry
121936038 CDS
T07740
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund00100
Steroid biosynthesis
sund01100
Metabolic pathways
Module
sund_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121936038
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sund01006
]
121936038
Enzymes [BR:
sund01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
121936038
Prenyltransferases [BR:
sund01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121936038
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2951
Motif
Other DBs
NCBI-GeneID:
121936038
NCBI-ProteinID:
XP_042333745
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All DBs
Position
1:7633529..7661418
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AA seq
451 aa
AA seq
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MAHSSKAAGALWKRTLGLSPSRGGGGRLRPGRLQAAPPPSRPRFLASPPGSLPPPPPAAS
SPLLCLQDSLSASLRLCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDM
TINLETKVPMLENFHSYLYQPDWRFMESNEKDKQVLEDFPTISLEFRNLAKVYQDVIANI
CHKMGLGMAEFLEKKVESEKEWDKYCHYVAGLVGIGLSQLFSASQLEDPIVGQDTELANS
MGLFLQKTNIIRDYLEDQLEGREFWPREVWSKYAKKMSDLAKPENIDKAVQCMNELITNA
LHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNQQVFRGVVKIRKGQAVTLMM
DATNIQAVKAIMYQYVEEIYQKIPSTDPSSSRTQQIVVSVRSMSLPGGVLVSRTHYSPIY
LSCVMLLAALSWQYLSTVSKVAEEYVHTGEN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcccacagctccaaggcggcgggggctctctggaagcggaccctgggcctctctccc
agccgaggaggaggagggcggctgaggcccgggcggctccaggcagcccctccgccctcc
aggccccgcttcctggcctcccccccgggctcgcttcctcctcctcctcctgctgcctct
tctcctctgctctgcctccaggactcgctcagtgccagcctccgcctctgctacctctac
ctcaaccagaccagccgcagcttcgccgccgtcatccaggccctcgacggggagctccgc
catgcagtttgcatcttctacttggttctccgggctctggacacggtggaggatgacatg
acaatcaacctggaaactaaggtccccatgttagagaacttccattcctacctgtatcag
ccagactggcgattcatggagagcaatgagaaagacaagcaagtgctggaggatttccca
acgatatccttggagttccggaacctagcaaaggtctatcaggatgtgattgctaacatt
tgccacaagatgggccttgggatggccgagttcttggagaagaaggtggagtctgagaag
gagtgggacaagtactgtcactacgttgctggcctggtggggatcggactctcccagctc
ttctctgcatcccaactggaagaccctattgttggtcaggatacggagctcgccaattcc
atggggcttttcctgcagaaaaccaacatcatccgggattatctagaggaccagcttgag
ggcagagagttttggccccgagaggtttggagcaagtacgcaaagaagatgtcagatctg
gccaagcctgaaaacattgacaaagctgtgcagtgtatgaacgagctcattactaatgcc
ttgcatcacgttcctgatgtattgacgtacttgtctcgactgaagaaccaaagtgtgttt
aacttctgtgccatcccccaggtaatggccattgccactttggcagcctgctacaacaac
cagcaggtcttcaggggagtggtgaagattcggaaggggcaagccgtcacgctgatgatg
gatgccaccaacatccaggctgtcaaagccattatgtaccagtatgtggaagagatctac
cagaagattcctagcacagacccttcctccagcagaactcaacagatcgttgtctctgtc
cgctccatgagcttacctggtggagtgctggtctcccggacccattactcccccatctac
ttatcctgtgtgatgcttttagcagccctgagctggcagtatctgagcacagtgtcgaag
gtggctgaagaatacgtacacactggggagaactga
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