Sceloporus undulatus (fence lizard): 121936261
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Entry
121936261 CDS
T07740
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sund03000
]
121936261 (RC3H2)
04121 Ubiquitin system [BR:
sund04121
]
121936261 (RC3H2)
Transcription factors [BR:
sund03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
121936261 (RC3H2)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121936261 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-CCCH_4
zf-C3HC4
Prok-RING_4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
121936261
NCBI-ProteinID:
XP_042334230
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Position
7:complement(12338236..12360589)
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AA seq
1197 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTIKLSNLGENKHYEVAKKCVEDLALYLRPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTNDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKITATVRTFPLLGKAAVTSPVSTTAGNVISII
GSPEMAGKLVPNPNGIGSLESGVPQLVPRCSDTSSLRILESAKKAGKAGTNGQNISGSPT
DPLPENKIGSPPKTPVSQSAATSIGPPPPPPPPVGTEMSPIAPKSGPFAARVPIYPPHSD
NLQYFQDPRAHLSYEAPHYAQAGYYAPPPTVPAGVTPCLPRFVRSGNVPESPLPPASVPY
GDHYNAFPPRDRLSSPYQQPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSN
SLPPMDVVHPSVYQTFLRERYNSLDSYYSVACPLPAEQRTVALSREPCSHLKPAYDDPLR
RKPEQWAPCHAQKTPLVSSSVLPTATQSPPSPSPLFSVDLGTEFCESSGDLSGTKYEDDR
LSHYSPWSCGTISSCINTIESEPKDVIANSGTVLLDLDSGDMKRRVHLFETQRRVKEEDP
IIPFGDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISMSDYIPYVSTVDSRWS
SYTSDSTSSASFIERDRFIVTDVSAPRKHSSTGDLLSIELQQAKSNSLLLQREANALATQ
QKWSSLNEGSHLALNLLSKDIDLRNSEVDYPEDGADTKPDRDIELELSALDADEPDGQGE
QIEEILSLQLGIGDRDEHLFNGSTLENGHSLEQKEARQPKQPSLGENLAILEKQKVVLPV
TSCFIQPSACSVSSMSNSTPIATSVNVGSLALKAAHIMEEGTSGFLRPAANGKMVHS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcggcccagtggacggagttcctgtcctgcccaatctgctacaacgag
tttgacgagaacgtgcacaagcccatcagcttaggctgctcccacaccgtctgcaagacc
tgcctgaataagttgcaccgcaaggcctgcccttttgaccagacagccatcaacaccgac
atcgacgtgcttcctgtcaactttgcacttctccagttagttggagcccaggtccctgat
caccagaccatcaaattaagcaatctaggagagaacaaacactatgaggtggcgaagaag
tgtgtcgaagatctggcgctttatttaaggccgctaagcggaggcaagggtgttgccagt
ttgaaccagagcgcactgagccggccaatgcaaaggaagctggtcaccctggtgaactgt
cagctggtcgaagaggagggtcgggtcagggccatgcgggcagcccgctctctcggggag
cgaaccgtgaccgagctaatcctgcagcaccagaaccctcagcagctctctgccaacctc
tgggctgctgtccgggcacgaggatgccagttccttgggccagctatgcaggaggaagcc
ttgaagctggtgcttctggccttggaagatggatcagccctctcccggaaagtcttggtg
ctttttgttgtccaaaggctggagccaagattccctcaggcatcaaaaaccagcatcggc
cacgtggtgcagctgctttatcgagcttcatgcttcaaggtcaccaaaagggacgaggat
tcttccctgatgcaactgaaagaggaatttcgcagctacgaggcattgaggagggaacat
gatgctcagattgtccacattgccatggaagctgggcttcggatctcgccagagcaatgg
tcttccctcctttatggcgatctagcccacaagtcccacatgcagtccatcatcgacaag
cttcagtccccagaatcctttgccaaaagtgtgcaggaattgacaatcgttctgcagcgt
acaaatgaccccgcaaatttaaacaggcttcgcccccatttggagcttttggccaacata
gatcctaatccagatgctgcatctccaacatgggaacagctggaaaatgccatggtggcc
gtgaagacggtcgtccatggcctggtggacttcatccagaactatagtaggaaaggccat
gaagccccacagcctcagccaaacagcaaatacaaaacaagcatgtgccgtgacctgcgc
cagcaaggcggctgcccccgagggactaactgcacttttgctcactctcaggaggagctg
gagaagtatcggcttaggaacaagaagatcactgccacagtacggaccttccctcttcta
ggcaaagctgctgtcacaagccccgtgtccacaactgcagggaatgtaatttccattatt
ggaagcccggagatggctggaaagctagtgccaaaccccaacggcattggaagtctagag
agcggcgtgccccagcttgttccccgttgctccgacacgtcttccttaaggattctggag
agtgcaaagaaggcagggaaggctggaaccaatggccagaacatctccgggtctccaaca
gatcctctgccagaaaacaaaattggttcgcctccgaagactccagtcagccagtcagca
gctacctcaataggtcctcctcctcctcctcctcctcctgttgggacagagatgagcccc
attgctcccaaatctggcccttttgctgccagggtgcctatctacccaccacattcggac
aacctgcagtattttcaagatcccagggcccatctctcctatgaggccccgcactacgca
caagcaggttactatgcaccgccaccaacggtcccagctggtgtgactccttgcctccct
cgctttgtgaggtctggaaatgtcccggagtcgcctctcccacctgcttctgtgccctac
ggtgaccattacaatgcatttccccctcgggacaggctgagctctccgtaccagcagccc
ccaccacagccatatgggccagtgcccccggttccctctgggatgtacgctccagtctat
gacagccggcgtatctggcggccgcagatgtacccgcgagatgatatcatcaggagcaac
tccttaccacccatggatgtcgtccacccctccgtctaccagacttttctgcgggaaaga
tacaactcgctggatagctactactctgtggcttgcccgctgccagcagagcaaaggaca
gtggctttgtcgagggagccttgcagccacctgaagcctgcttatgatgacccgctcaga
aggaaaccagagcagtgggctccgtgccatgcacaaaaaacacctcttgtgtcatcctct
gtccttccaacagctacgcagtctccaccatcaccttcccctcttttcagtgtggacctg
ggcacagagttctgtgagagctctggcgatttgagtggcaccaaatacgaggacgaccgg
ctctcccactactcgccctggtcctgtggcaccatcagctcctgcatcaacaccattgag
tctgagcccaaggatgtcattgccaactcaggcacggtactcttggatctggacagcggt
gacatgaagcggcgggtgcatctctttgaaacccagaggcgggtgaaggaggaagacccc
atcattccttttggtgacgggcccatcatctccaaatggggtgccatctcccggtcatca
cgcacaggttaccacacaacagacccgatccaagccactgcttcccaaggaagtgctaca
aagccgatcagcatgtcagattatatcccatacgtcagcaccgtcgattcaagatggagt
tcctacacgtcagattctacttcatcggcatctttcatagaacgggatcggttcattgtt
acagatgtctctgccccaagaaagcactctagtactggagatctactgagcatagaactg
cagcaggccaaaagtaactccttactgcttcagagagaggcaaatgcactagccacgcag
cagaagtggagctccttaaacgaaggtagccacctcgccttaaaccttctgagcaaggac
atcgatctgaggaacagcgaggtggactatcccgaggatggcgcagacacaaagccggac
cgagacattgaactggaactttcagcgcttgatgccgatgagcctgacggacagggagag
caaattgaagagattctcagcctgcagcttgggattggcgatcgagatgaacatctcttc
aacggttcaacactggaaaatggccactcgctggaacagaaggaagccaggcagccaaag
caacccagtttaggtgaaaaccttgctattctggagaagcagaaagtagtcttgccggtg
acttcttgcttcatccagccgtcggcctgctccgtgagcagcatgagcaacagcacgcca
attgcgacatccgtgaatgtgggcagcctggccctcaaggcggcccatatcatggaggaa
gggacaagtggctttctaaggccagctgcaaatggcaagatggttcacagttga
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