Sceloporus undulatus (fence lizard): 121936640
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Entry
121936640 CDS
T07740
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04020
Calcium signaling pathway
sund04080
Neuroactive ligand-receptor interaction
sund04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121936640 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121936640 (GRIN1)
04082 Neuroactive ligand signaling
121936640 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121936640 (GRIN1)
Ion channels [BR:
sund04040
]
Ligand-gated channels
Glutamate (ionotropic)
121936640 (GRIN1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
121936640
NCBI-ProteinID:
XP_042334988
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All DBs
Position
7:11316783..11347563
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AA seq
960 aa
AA seq
DB search
MRLLLLGVLVWFSLARAGCEPKVVNLGAVLSTKKHEAVFREAVAQANKRHGAWKIQLNAT
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIGLTT
RMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRFYKWNHIILIVSDDHEGRAAQKKLETL
LEEKESKSKKRNYDSLEQLSYDNKRGPKAEKVLQFEPGTKNVTSLLLEAKELEARVIILS
ASEDDATTVYTAAAKENMTGPGYVWLVGEREISGNALRSAPEGLIGLQLMNGKNESAHIR
DAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMQTKYADGVTGRVEFNE
DGDRKYANYSVMNLQNNKLVQVGVYNGSHFLPNDRKIIWPGGETETPQGYEMSTKLKIVT
IHQEPFVYVKPTQLDGKCEARHNSTGGLVQQVLCTGPNETMPGRPSVMLCCYGFCIDLLI
KLAKTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILNLHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQSSLSLVAVGFTFRKGPEHFYL
VDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctgctgctgggggtgctggtgtggttctcgctggccagggccgggtgcgag
cccaaagtggtgaacctcggggcggtgctgagcaccaagaagcacgaggccgtcttccgc
gaggcagtggcccaggccaacaagcgccacggcgcctggaagatccagctcaacgccacc
tccgtcacccacaagcccaacgccatccagatggccctctccgtctgcgaggacctcatc
tccagccaggtctacgccatcttagtgagtcacccaccggctccaaatgaccacctcacg
ccaacgcctgtctcctacacagccggattctataggataccagtcattgggctgaccacg
cgcatgtccatatattcggataagagcatccacttgtccttcctgcgcacggtcccccct
tattcccaccagtccaatgtctggtttgaaatgatgcgcttttacaagtggaaccacatc
atactcatcgtcagcgatgatcatgaggggcgagcggcccagaagaaactggagaccctc
ttagaagagaaagaatcaaagagtaaaaaaaggaactatgacagcctcgaacaactatcc
tatgacaacaagcgaggacccaaggctgagaaggtgctccagtttgaacccgggacaaaa
aatgtcacttcgctgctcttggaagctaaggaactggaggctcgggttatcatcctctcc
gccagtgaggatgatgccaccaccgtctacacggctgcagcgaaagagaacatgactggt
cccggctacgtgtggcttgtgggggagagggagatctcgggcaatgccctgcgcagtgcc
ccagaaggactgattggcttgcagctcatgaatgggaagaacgagtctgctcacatcagg
gatgcggtggcagtggtggcccaggccgtccatgacctctttgagaaggagaatatcaca
gacccaccgaggggctgtgtgggcaacaccaacatctggaagactggcccgctcttcaag
agggtgctcatgcagaccaagtatgcggatggtgtgacaggcagagtggagttcaatgag
gatggggataggaaatatgccaactacagtgtcatgaacctacagaataacaaactggtg
caagtcggagtctacaatggtagccactttctgcccaacgaccgcaagatcatctggcct
ggaggagagacagagacgccgcagggctatgaaatgtctacaaaactaaagattgtcacc
attcaccaagagccgtttgtctatgtgaagccgacccagttagacgggaagtgtgaagcg
cgccacaacagcaccggggggttggtgcagcaggtcctctgcactgggccaaacgagacc
atgccaggccgccccagtgtgatgttgtgttgttacggattctgcattgacttactcatc
aagctcgccaagacaatgaatttcacctatgaagttcacctggtggccgatggcaaattt
ggaacccaagagcgggtgaacaacagcaacaagaaggagtggaacgggatgatgggtgag
ctgctgagtggccaggccgacatgattgtagccccactgaccattaacaacgagcgggca
cagtacatcgaattctccaagcccttcaagtatcagggactcaccatcctggtcaaaaag
gaaattccccgcagcacgctggactcgttcatgcagccattccagagcactctgtggctc
ttagtggggctctcggtgcacgtggtggctgtgatgctatacctcctggaccgcttcagc
ccgtttggccgatttaaagtgaacagcgaagaagaggaagaggatgctctgacactctct
tctgccatgtggttttcctggggagtcctgctgaactctggcattggagaaggcgctcct
cggagtttctcagctcgaatccttggaatggtgtgggctggatttgccatgattatcgtt
gcctcctacactgccaacctggctgccttcctggtgttggacagaccggaggaacgaatc
actggcatcaatgaccccaggctgcgaaacccttctgacaagttcatctatgccactgtg
aagcagagttctgtagacatttacttccggcggcaggtggagctgagcactatgtaccgg
cacatggagaaacacaattatgagagcgccgcagaagccatccaggctgtccgggacaac
aagctccatgcattcatctgggactcagctgtactggagtttgaagcttcacagaagtgt
gacctggtgacaacgggggagctcttcttccgctctggctttggcatcgggatgcgcaag
gacagcccctggaagcagaacgtctctctggccatcctcaacctccacgagaacggcttc
atggaagagcttgacaagacctgggtgaggtatcaggagtgtgactcccgcagcaatgcc
ccagcgaccctcacttttgagaacatggcaggtgtattcatgctggtggctggaggtatt
gtggccgggatatttttaatattcatagaaatagcatacaaaaggcataaagacgcccgg
aggaagcagatgcaactggcgtttgcggctgttaatgtgtggcggaaaaacctgcagtcc
tctctctctcttgtggccgtaggattcaccttcagaaaaggccccgagcatttttattta
gtggatagaaaaagtggtagagcagaaccagaccctaaaaagaaagccacttttaggtcc
atcacctctaccctggcctccagcttcaagagacgtaggtcatccaaagatacgcagtat
caccctacagacatcactgggcagctcaacctctccgacccctcggtcagcaccgtggtg
tga
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