Sceloporus undulatus (fence lizard): 121936887
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Entry
121936887 CDS
T07740
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121936887 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121936887 (HBS1L)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121936887 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
121936887
NCBI-ProteinID:
XP_042335502
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All DBs
Position
1:94674958..94734502
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AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEEDDLYGQSVEDDYCISPSTAAQFIYSRRDNPGGYAETLEEEEY
GYEDTEHSNCISNRPLTGVEKAQLESCLDHMREVLGESVAEKVMVDAVLQSKFDVQQALD
FVLSQDKQNMKTKNEDTVLTGKATKGKARESQATRIESDIVPKVTKMTVSGRKQTTGFEV
PGMTVEENGHNIFPPQKGFSSGDANANLGAAEILSKPVLPPQTIQPLEEPIVAPTQKRSG
KAKQQIDVKAELEKRQGGKHLLNLVIIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EIVNKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSELTKWYEGKCLLEQIDSFKS
PQRSVDKPFRLCVSDVFKDQGSGFCVTGKIDAGYIQVGDRLLAMPPNETCTVKGIALHDE
PVDWAAAGDHVSLTLTGMDIIKINVGCIFCCPKEPIKACTRFRARVLIFNIEIPITKGFP
VLLHFQTVSEPATIRKLLSVLHKSTGEVTKKKPKCLTKGQNALIELQTQRPVALELYKDF
KELGRFMLRYGGSTIAAGVVAEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcataggaacgtgcgtggctataactacgacgaagattttgaagaagatgat
ctctatggacagtctgtagaggatgattattgcatttcaccctcaacagctgctcagttt
atatattcgagacgggataatccaggaggatatgctgagacgttagaagaagaagaatat
ggctatgaagatacagaacatagcaattgtatttctaatcgcccattaactggagttgaa
aaagctcagcttgagtcatgccttgaccatatgagagaagtgcttggagagtctgtggca
gagaaggtgatggtggatgcagtgctacagagtaaatttgatgtacagcaagctttggat
tttgtgctttcacaagacaaacagaatatgaagacaaaaaatgaggatactgtgcttaca
ggaaaagcaacaaaaggaaaagcccgagaatcccaggcaacaaggattgaatcagacatt
gtgccaaaagtaaccaaaatgactgtatcgggaagaaaacaaactactggttttgaagtt
ccaggcatgactgttgaagagaatggtcataacatttttccgccccaaaagggattctca
tctggagatgccaatgccaatttgggagcagctgagattctatctaaaccagttcttcca
ccccagaccattcagccattagaagaaccaatagtggcaccaactcaaaaaagatctggg
aaagcaaaacagcagatagatgtgaaagctgagttggagaagagacaaggtggaaagcat
ttgcttaaccttgtaataataggacatgttgatgcagggaaaagtactctgatgggccat
ttattatatctcctgggaaatgtgaacaaaagaactatgcacaaatatgagcaggaatcc
aagaaagctggaaaagcatcatttgcttatgcatgggtcttagatgaaacaggggaagag
agagagagaggagttacaatggatgtaggtatgaccaaatttgagacaaaaacaaaagtt
attacattaatggacgctcctggccataaagacttcattccaaatatgatcacaggagct
gcacaggctgatgtggcaatattagtggtagatgccagcagaggggagtttgaagcagga
tttgagactggtggacaaacacgagaacatggcctgttggttcgatctcttggagtaaca
caattggcagttgcggttaataaaatggaccaggtcaattggcaacaggaaagatttcag
gaaatcgtcaataaacttgggcagttccttaagcaagctggctttaaggaatcagatgta
gcctatatccctacaagtggccttgggggagaaaatcttgtcacaagaagtcagtcgagt
gagctgaccaaatggtatgaagggaaatgcttgctagaacaaattgattctttcaagtcg
cctcaaagatcagtggataaaccattcagattatgtgtatcagatgtttttaaagatcag
ggctcaggattttgtgtgactggtaaaattgatgcaggctacatccaagttggagatcga
cttctggcaatgcctcctaatgaaacttgcactgtgaaaggaattgctctacatgatgaa
ccagtggattgggctgcagcaggagatcacgttagtctcactttgactggcatggatatc
atcaaaatcaatgttggctgtatattttgttgtcctaaggaacctattaaagcttgcaca
cgattcagagcccgagtcctcatctttaatattgaaatccctatcaccaaaggattccct
gtacttcttcattttcaaactgtaagtgagcctgctactatccgaaagttattgagtgtt
ctacacaagagtacaggtgaagtcacaaaaaagaagcctaagtgtctaactaaaggacag
aatgctttaatagaactgcaaacgcaaagacctgttgctctggaactttataaagacttt
aaggaacttggaaggttcatgttgcgttatggtggatccactatagcagcaggagttgtt
gccgagattaaagaatga
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