Sceloporus undulatus (fence lizard): 121937012
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Entry
121937012 CDS
T07740
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund02010
ABC transporters
sund04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121937012
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121937012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sund02000
]
121937012
Transporters [BR:
sund02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121937012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
121937012
NCBI-ProteinID:
XP_042335728
LinkDB
All DBs
Position
7:25610507..25652382
Genome browser
AA seq
2270 aa
AA seq
DB search
MGFGIQLALLMWKNFTYRRRQKLQLVIEILWPLFLFFILISVRRTDPPFEQHECHFPNKA
LPSAGTLPWIQGIFCNANNPCFRYPTAGETPGVVENFNHSIISRLFADAQKMLRRLNDQK
TQTSLSQLLSILRRLGNHGSSRSALEVRDYLKENETFSQFLRTNASFSPALAEELLGAQL
NLRVFSLAGTPLQQIVCNASLLPEFLVIEDAKAAERVQQGLCALPGTTLQALERTFFSQV
DWVKVLAERLSSRSVDVANAVEAFRVFLQGTDSLAKEVSSSTSFEEFRAALRVFSGQDGT
LTPQQVFETVSRVICGHPERGGLKIPSLNWYEDNDIKSFLGRNDSVKKTVALDNSTSPFC
KDLVQMLESSPLTRILWRGIKPLFVGKILYTPSTPATQKVMAEVNQTFRNLAVLGEVKGA
WDELGPQIYTFMNTSLELGVIQNFLETPGVAQLLEQQLQGTSWNLSTVKDFLSPDVKSEG
YTWRKAYAQVDEAIRMLSQFLECVSLNKIEAVASEEQLIMRAMQLLEDRQFWAGVVFLPP
DNQSEMAADLPPHVHFKIRMDIDDVTRTNKIKDRFWDPGPAADPFDDLRYIWGGFVYIQD
LVEQAVIRVLAGRSASQQRSGIYVQQMPYPCYVDDIFLRVLNRSLPLFMTLAWIYSVAMI
IKGVVHEKEARLKETMKIMGLSSATLWLSWFLSSFIPFLISASLLVLILKVGDILPYSDP
AVVFLFLGTFAVATISQCFLISTFFSRANLASACGGIVYFSFYLPYVLCVAWRDHITFPL
RLLASLLSPVAFGFGCEYFSLYEEQGVGLQWHNLNASPVEGDRYTFATSGGLLLLDAFLY
GVATWYIEGVFPGQYGIPKPWNFPILKSYWFGDSSSDGSPYPIPMNLSNSAEVIVEEPPS
HLKVGVSIRNLVKIYHSSSKIAVNGLSLDFYEGQITSFLGHNGAGKTTTMSILTGLLPPS
SGTAYIMGRDICSEMDTIRKTVGMCPQHNVLFDILTVEEHIWFYGRLKGLSGQQVEGEME
QIIQDVGLPHKRREQTKRLSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYSRRGIWEL
LLKYRAGRTVILSTHYMEEADLLGDRVAIISQGRLCCCGSSLFLKTKLGTGYYLTLVKRE
ADSGTTNGVVLANEKACSDSEMSCDTGLGSEQNSEATAPDVHQLTLLIQRLVPGSKLVED
IGQELLYVLPYSGAKDGTFGELFQELDARLAELGISGYGISDTSLEEIFLKVAEDTNVDA
TGDPEVPPQAPRMATPTSTSTLKSLSEETDVADAELAKGHKKEEAKETDLLRGVSPQTSF
RLTGWSLIWQQLRALFTKRLLYAQRSRRGFFAQIVLPAVFVCIALFFSLIVPPFGKYPPL
RLEPWMYGPQFTFFSDDSPGDPGSAHLLKALLDDPGFGTKCMKDKAELKDPCPRPASHTE
QSFETPDVPDSVMEVFKKGNWTLANPSPECVCSSSASRKMLPDCPEAAGGLPPPQMQRNT
GDILHNLTGRNISDYLVKTYPKVIRKELRNKKWVNEQWYGGLSLGVRKLEDLPSSKEVAN
AMKEIRQLFAVPKGSSLDRLLSNLTGFVDGLETRQNLKVWFNNKGWHAMVSFVNVASNGL
LRASLPAGAEHSHYGITAINHPLNLTKEQLSQAAIMATSVDVLVSICVMFAMSFVPASFV
LFLIEERVTKSKHLQFVSGMKPIVYWLGNFAWDMCNYLVPAILVVLIFLCFQQKSYVSAA
NLPSLILLLLLYGWSITPLMYPASFFFSIPSTAYVALTCVNLFIGINGSVATFVLELFTD
QTLNRVNVVLKKVFLIFPHFCLGRGLIDMVKNQAMADAFERFGDQKFVSPLSWELVGKNI
FAMAIEGVFFFCFTILMQYKFFIHLRLFPVKLPPLEKEDEDVAKERRRITSGAPRGDILV
LQDLTKVYRRSKKPAVDRLCLGIPAGECFGLLGVNGAGKTSTFKMLTGDSEVTSGKAFLK
GYSVLKDLQMVHQNMGYCPQFDAINDLLTGREHLAFYCRLRGVPENEIPGVVKWGLSTLG
LVQYADRPAGRYSGGNKRKLSTAIALIGAPPIIFLDEPTTGMDPRAKRFLWNCILGVIKD
GRSVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNKFGDGYTIILRISGTNPDTG
PVEKFIQDSFPGIVLKEKHYCTLQYQLPSCNCSLAKIFGTLSAHRSDYHIEDYSVSQTTL
DQVFVHFAKEQSDENTPGDLSATTHPEVTTRPWRKILGFLEDKNVQETRV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgggatttggcatccaactggcgctgctgatgtggaagaacttcacctaccgccgcagg
cagaagttacaactggtcatcgaaatcctctggccgctcttcctctttttcatcctcatt
tcagtccgtcggacagatccaccatttgaacagcatgaatgtcacttccccaacaaggcg
cttccatctgccgggactttgccatggattcagggcatcttttgtaatgcaaacaacccc
tgcttccggtatccgacggctggagagaccccaggtgttgtggagaacttcaaccattcc
attatctcccgtctctttgctgacgcccaaaagatgcttcgccgcttgaacgaccagaaa
actcagacaagtctctctcagctcttgtccatcttgcgccgtctgggcaaccatggcagt
tcgcgttcggcccttgaggtcagggactacctgaaagagaatgagaccttttcccagttc
ctccggaccaatgcctccttttcgcctgccttagcggaggaactacttggggctcagctc
aacctgcgtgtgttctcccttgctggcacgcccttgcagcaaattgtctgcaacgcttct
cttctccctgaatttctggtaattgaagatgccaaagctgctgagcgggtgcaacaaggg
ctatgcgccttgcctggcaccacccttcaagccctggagcgcaccttcttctcccaggtg
gattgggtcaaagtccttgcggagcgtttgagctctcgatcggtcgatgtggcgaacgcg
gtggaagctttccgggtttttctccaaggaactgactctttagccaaggaggtgtcctcc
tcgaccagctttgaggagttccgtgcagccctccgggttttctctgggcaagatggcacc
ttgacccctcaacaagtgtttgagaccgtgtcgcgtgttatctgtgggcacccagaacga
ggaggactcaagatcccctctttaaactggtatgaggacaacgacatcaagagcttcctt
ggtcgcaacgactccgtgaagaagactgtcgccttggacaattccacaagtcccttctgc
aaagatctggtgcagatgttggaatccagtcctctgacgcggatcttatggagaggaatc
aaacccctgtttgttggcaaaatattatacactccttcgacaccagccacacagaaggtg
atggcagaggtgaaccagacttttcggaatctcgccgttttgggggaagtgaagggagct
tgggatgagcttggaccccagatttacaccttcatgaatacaagcctagagctgggagtg
atacagaattttctggaaacgccaggtgtggctcagcttttggagcagcagctccaaggg
acgtcttggaatctgtcgactgtgaaggatttcctatcgcccgatgtcaaaagcgagggc
tatacttggcgcaaagcctatgcccaagtggatgaagcgatccggatgctctcccagttc
ctcgagtgtgtctctctgaacaagatcgaggcagtggcttcggaagagcagcttatcatg
cgtgccatgcagttgttggaggatcgccagttctgggctggagttgtcttcttgccacca
gacaaccagagcgagatggcggcagatctacctcctcatgtccacttcaaaatccgaatg
gacatcgacgatgtcacccgcaccaacaagatcaaggacaggttttgggatccgggacca
gccgctgaccccttcgatgacctacgctacatctggggtggtttcgtctacattcaggac
ctggtggaacaggctgtgatccgggttcttgctggccggtcggcatctcaacagcgtagt
gggatctacgttcagcagatgccttacccttgctacgttgatgacatcttcctacgcgtc
ttgaaccgttccttgcctctcttcatgacgttggcttggatctactcggtggccatgatc
atcaaaggggtggtccatgagaaagaagcccggctaaaggagaccatgaagatcatgggc
ctcagcagcgctaccctctggctgagctggttcctgagcagtttcatcccgttcctcatc
agcgcatctttgctggtcctcatcctcaaggtaggagacatcttgccctacagtgaccct
gccgtagtcttccttttcctgggcacctttgcagtggcgaccatctcccagtgtttcctc
atcagcacgtttttctcacgcgccaacctggcgtctgcctgcggagggatcgtctacttt
tccttctacctcccctacgtcttgtgcgtggcttggcgggaccacatcactttccctctg
aggctcttggcgagtttgttgtctccagttgcttttggctttgggtgtgagtatttctcc
ctttatgaggagcaaggcgtgggcctccagtggcacaacctgaacgcaagccccgtggaa
ggagaccgttacacctttgccacttctggcgggttgcttctcttggatgcctttctctat
ggtgtggccacatggtacattgaaggcgtgttcccaggccagtatgggatcccaaagcct
tggaattttcccatcctaaagagttactggtttggggattcctccagcgatggttcccct
tatcccattcctatgaatctttccaattccgctgaagtgattgtggaagagcctccatct
cacctgaaggttggcgtctccatccgcaacctggtgaagatttaccacagcagcagcaaa
attgctgttaacggactcagcctggacttctacgaggggcagatcacatccttcttggga
cacaatggtgctgggaagaccaccactatgtctatcttaactggcctattgccccctagt
tcaggcacagcgtacatcatgggacgggacatttgctcggaaatggacaccatccggaag
actgtgggcatgtgccctcaacacaacgtcctttttgatatcctgactgtagaagagcac
atctggttttatgggcgtctgaaaggcctctctgggcagcaggtggaaggcgagatggag
cagataatacaggatgtggggctgccccataagcgacgggaacagactaaacgtctatcg
ggagggatgcagcgcaagctctcagtcgccatcgcctttgtggggggctccaaggtggtg
attttggatgaacccaccgcgggtgttgatccttattcacgccgaggcatctgggaatta
ctgttgaagtaccgtgcaggtcgaacggtcatcctctccacccactacatggaggaggca
gaccttctgggtgaccgggtggccatcatctctcagggccggctctgctgttgtggatcc
tcactcttcctgaagaccaagctgggcaccggctactacctgaccctggtgaaaagagaa
gctgacagcggcaccacgaatggtgtggtgcttgccaacgaaaaggcttgtagcgattca
gaaatgagctgcgatacaggtctggggagcgaacagaacagcgaggccactgccccagat
gtgcaccagctaacattgcttatccagaggttggtccccggttctaaactggtagaggat
atcgggcaagagcttctctatgtcctgccgtacagtggggccaaagatggcacttttggg
gagcttttccaagagctggatgcacgcctggctgaacttggcatctcgggatatgggatt
tcggacaccagcttggaagagatcttcttgaaagtggcggaggacaccaatgtggatgcc
acaggggatccagaggtgccccctcaagcgcctaggatggccacgccaacctccacttcc
accctcaagtcattgagcgaagagacggatgtggccgatgccgaattggccaaaggacat
aagaaagaggaggcaaaggaaacggatctcttgcgtggcgtgagcccccagacctctttc
cggttgactggatggtccctgatttggcaacaactccgcgccctcttcaccaaaaggctc
ctctatgcgcagcggagcagacggggattctttgcgcaaattgtgcttccagctgtcttc
gtttgcattgcccttttcttcagcctgatcgtcccgccatttggcaagtatccacctttg
cgtctcgagccctggatgtacggacctcagtttacctttttcagtgatgattctccaggg
gaccctggctctgcccatctgctaaaagctcttctggatgaccctggttttggtaccaag
tgcatgaaagataaagcagaactgaaggatccgtgcccacggccagcttcccacactgag
caaagctttgagacgccggatgtcccagactcggtgatggaggttttcaagaagggtaac
tggactttggccaacccatctccggagtgtgtctgcagctctagcgcttcccgaaaaatg
ctgccagattgtcctgaagcggctggaggattgcctccacctcagatgcaaaggaacact
ggggacatcctccacaacctcactggccggaatatctctgactacttagtgaaaacatat
cccaaagtcatccgcaaagagctaagaaacaagaagtgggtcaatgaacagtggtatggt
ggcttgtctttaggtgtgcgcaagttggaggatctcccatcttccaaggaggtggccaat
gctatgaaggaaatccgccaactctttgctgtaccaaaggggagttcacttgacagattg
ctgagtaacctgacaggctttgtggatggattggaaacgcgtcagaatctgaaggtctgg
ttcaacaacaaaggttggcatgccatggtttctttcgtcaacgtggcaagcaacggtctt
ctgcgggccagcctgcctgctggggcagagcactcacattatggcatcaccgccatcaat
cacccgctcaacttgaccaaagagcagctgtcacaagcagccataatggccacttccgtt
gatgtgttggtctccatctgtgtcatgttcgccatgtccttcgtcccggcaagctttgtc
ctctttttgatcgaggaacgggtcaccaagtcgaagcaccttcagttcgtcagcgggatg
aaacctattgtttactggctgggcaacttcgcctgggatatgtgtaactaccttgtccct
gctattctggtggtgttgattttcctgtgcttccagcaaaaatcatatgtttctgcggcc
aacctaccatctctcattctgcttctgcttctttatggctggtccataacccccctgatg
tatccggcctccttcttcttcagcatcccaagcacagcctacgtggccctgacctgcgtc
aaccttttcatcggcatcaacgggagcgtggccaccttcgtcctggagctcttcactgac
cagacattgaacagggtgaacgtcgtccttaaaaaggtgtttctcatattcccccacttc
tgtctcggccgcggactgatcgacatggtcaaaaaccaagccatggctgacgcctttgag
cgattcggtgaccaaaagtttgtgtctccgctaagctgggaactggttgggaagaacata
tttgcaatggccattgaaggtgtcttctttttctgctttactatcctgatgcaatacaaa
ttcttcatccatctccggctctttcctgtcaaacttcctccgttggaaaaagaagatgaa
gacgtcgccaaagaaaggcggaggatcaccagtggagccccaagaggggatatcttggtg
ctgcaagatctcaccaaggtttaccggaggagtaagaagccggctgtggaccgtctgtgc
ctaggaatccctgctggagagtgttttggcctccttggcgtgaatggggctgggaagacg
tcgacgttcaaaatgttgactggagactcggaggtgacttcgggcaaagccttcctgaaa
ggttacagtgtactcaaagacctgcagatggtccaccaaaacatgggctattgcccccag
tttgatgccatcaacgatctcttgacgggccgcgagcacttggcgttctactgtcgcctg
cgcggggtcccagagaatgaaatccctggggtggtgaaatgggggttgtcaactcttggc
ttagtgcagtacgcggacagaccggccggtcggtacagcgggggcaacaagcgcaagttg
tccacagccatcgcacttatcggagccccgccaattatcttcctggatgagccaacgacg
gggatggatccgcgggccaaacgtttcttgtggaactgcatccttggtgtgatcaaggat
ggcagatctgtcgtactcacatcccacagcatggaagagtgcgaggcactatgcaccagg
atggccattatggtgaacggacgtttccaatgtctgggcagtgtacaacatttgaagaac
aagtttggagacggatacaccattatcctccggatctctgggaccaacccagacactggt
cccgtggagaaattcatccaggactccttccctggcattgtacttaaggagaaacactac
tgcactctccaatatcagctgccctcttgcaattgctccctggccaagatctttggcacc
ctctcagcccaccggagtgactaccacattgaagactactctgtctcacaaaccaccctt
gaccaggtgtttgtccactttgccaaagaacaaagtgatgagaatacccccggagaccta
tccgccacaacacacccggaagtcaccaccagaccttggaggaaaatcctgggattcttg
gaggataaaaacgtgcaagaaaccagggtctga
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integrated database retrieval system
