Sceloporus undulatus (fence lizard): 121937029
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Entry
121937029 CDS
T07740
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund00100
Steroid biosynthesis
sund01100
Metabolic pathways
Module
sund_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121937029
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sund01006
]
121937029
Enzymes [BR:
sund01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
121937029
Prenyltransferases [BR:
sund01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121937029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
CNV-Replicase_N
DUF4073
Motif
Other DBs
NCBI-GeneID:
121937029
NCBI-ProteinID:
XP_042335775
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All DBs
Position
1:7670088..7691702
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AA seq
418 aa
AA seq
DB search
MEQFKNWLGHPKELYNLVRFKMGGSKTVMLKMDEDSLSDSLRLCYQYLNQISWTYSIVVQ
VLEGELRHVLCIFYLVLRALDTVEDDMTINLETKIPMLQNFHSYLYQPDWRFMDSNDKHK
QVLEDFPTISFEFRKLAKVYQDVIADICHKMGLGMAEFLEKKVESEKDWDKYCHYVAGLV
GIGVSQLLSASKLEDSIVCQDTELANSVGIFLQKTNIIQDYLEDQLEGREFWPQEVCSKY
VKTVSDLAKPENIDKAVQCMNELITNVLHHIPDILTCLSQLKTQSVFNFCAIPQVMAIAT
LAACYNNQQVFRGVVKIRKGQAVTLVMNATNIQAVKAIIYQYMEEIYQKIPSTDPSSSKT
QQIITSIRSVTLPRGGLVSRTHYSPIYLSCVMLLAALSWQYLSMVSKMVEEHVHTGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtttaagaactggctgggccaccccaaggagctctacaacctggtgcggttc
aagatgggaggttccaagactgtgatgctcaagatggatgaagactcactcagcgacagc
ctccgcctctgctaccagtacctcaaccagatcagctggacctattccattgtcgtccag
gtgctcgagggggagctgcgccatgttctttgcatcttctacttagttctccgggctctg
gacacggtggaggatgacatgacgatcaacctggaaaccaagatccccatgttacagaac
ttccactcctacctgtatcagccagactggcgattcatggatagcaatgacaaacacaaa
caagtgctggaggatttcccaacgatatcttttgagttccggaagctggcaaaggtctat
caggatgtaattgctgacatttgccacaagatgggccttgggatggccgagttcttggag
aagaaggtggagtcggagaaggactgggacaagtactgtcactacgtcgccggcctggtg
gggatcggagtctcccagctcctctctgcgtccaaactggaagactctattgtttgccag
gacacagagcttgccaactccgtggggattttcctgcagaaaaccaacatcatccaggat
tatctggaggaccaacttgagggcagagagttttggcctcaagaggtttgcagcaagtat
gtaaagacagtgtccgatctggccaagcctgagaacattgacaaagcagtgcagtgtatg
aacgagctcatcaccaacgtcttacatcacattcccgacatcttgacatgcttgtctcag
ctgaagacccaaagtgtgttcaacttctgtgccatcccacaggtaatggctattgctacc
ttggcagcctgctacaacaatcagcaggtcttcaggggagtggtgaagatccggaagggg
caagccgtcacactggtaatgaatgccaccaacatccaggctgttaaggccatcatatac
cagtacatggaagagatctaccagaagattcccagcacagacccttcctccagcaaaact
caacagatcatcacttctatccgctccgtgaccttacccagaggaggacttgtctccagg
acccattactctcccatctacttgtcttgtgtgatgcttttagcagccctgagctggcag
tatctgagcatggtgtcgaagatggtggaagaacatgtacacactggggagaactga
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