Sceloporus undulatus (fence lizard): 121937064
Help
Entry
121937064 CDS
T07740
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121937064 (MEX3D)
04121 Ubiquitin system [BR:
sund04121
]
121937064 (MEX3D)
Enzymes [BR:
sund01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121937064 (MEX3D)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121937064 (MEX3D)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121937064 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
KH_DEAH11_2nd
RING_XB3-XBAT31
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121937064
NCBI-ProteinID:
XP_042335861
LinkDB
All DBs
Position
7:24696634..24703115
Genome browser
AA seq
595 aa
AA seq
DB search
MPSSAFAQRLEGGEGPGGAPPVLAGLLLSPPEEQEEEEEGEADPASAQLPLALGHHHHHQ
QQQQLSLVLGMPEEQERDGGEGQEEEGGGAGMEQALAYPAGPGEPGPALLLLLEPPGGPP
GPELYGTPFPLPPPPAPLLPGNPSLGTIGSHKRSVNMTECVSVPTSEHVAEIVGRQGCKI
KALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSMIRATRNKVNGVAG
SLLGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTG
MPENVDRAREEIEAHITMRTGSFIDINADNDFHSNGTDVCLDLLTGNHSGLWSKAPNPSR
RSLPAFRSNNHLGSSGTEPYFDGVPRSPFASGGSFSFNEPPGPTMASDECDFGFDFMALD
LTTPTAIWSPFEPATNPLQAFGSSSSSSSINGVCQRRNSSLSGTATPRQSPTLPEMEHPL
ARRIQSDPVNALSWLPTQGSLSSFSNSTGYSSSSSLPGSVSATSGSPTDSSSSSDGARKN
SRECMVCFESEVIAALVPCGHNLFCMECAMRICGQPDPECPVCHTPATQAIHIFS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcagcgccttcgcccagcgcctggagggaggtgaagggccggggggcgcccct
cccgtcctggcaggacttctgctgagccccccggaggagcaggaggaggaggaggaagga
gaggcagaccccgcctctgcccagctccccctggccctcgggcaccaccaccaccatcag
cagcagcagcagctctccctcgtcctgggcatgccagaagagcaagagagggatggaggg
gaaggccaggaggaggaaggaggaggagcagggatggagcaggccttggcctaccctgcg
gggccgggggagcctggccctgccctgctcctcctgctggagccccccggaggcccccca
gggccagagctctatgggacccccttccccctgcctccccctccagccccgctcttgcca
gggaacccctccctgggcaccatcggcagccacaagaggagcgtcaacatgaccgagtgc
gtctccgtccccacctccgagcatgtggccgaaatcgtcggcaggcaagggtgcaagatc
aaagccctgagagccaaaaccaacacttacatcaagaccccagtgagaggagaagagccg
gtcttcattgtgacgggacggaaagaggacgtggagatggccaagcgggagatcttgtcg
gccgctgagcatttctccatgatccgggccacgcgcaacaaggtcaacggtgtggcaggc
tcgctcctggggcctccgaacctcccgggccagaccaccatccaagtccgagtcccatac
cgggtggtggggctcgtcgtcggtccgaagggggccaccatcaaacggatccagcagcaa
acccacacgtacatcgtgaccccaagtcgggacaaggagccggtctttgaggtgaccggc
atgcccgagaacgtggaccgagcacgggaggagatcgaagcccacatcaccatgaggacc
ggctccttcatcgacattaacgccgacaacgacttccattccaatggcactgacgtctgc
ctggacttgctgaccggcaaccattctggcctgtggtccaaagcgcccaacccttcccga
cggagcctgcccgccttccgcagcaacaaccaccttgggtcctcggggaccgagccttac
tttgacggggtgccccgcagtcctttcgcctcgggcgggagcttctcgttcaacgaacct
ccggggccaacgatggcttccgatgagtgcgattttggctttgatttcatggccttggac
ctcacgactcccaccgccatctggtccccattcgaacctgccactaaccctctccaagcc
tttggcagctcgtcgtcctcctcctccatcaacggcgtttgccaacgacgcaatagcagc
cttagcggcacggccaccccacgccagtcgcccactctcccagagatggagcacccatta
gcccgacgcatccagagcgacccagtcaacgccctctcctggttgccaacccagggttcc
ctgtcttcattctccaacagcacgggctactcctcttcttcctccttgcctggcagcgtc
tccgccacttccggctctccgacggattccagcagctccagtgatggagcccgcaaaaac
tcccgcgagtgtatggtctgcttcgaaagtgaggtgattgccgccctggtgccgtgtggt
cacaaccttttctgcatggagtgtgcaatgcgcatctgcgggcagccagacccagagtgt
ccagtttgccacacgccggccacacaagccatccacattttctcatag
DBGET
integrated database retrieval system
