Sceloporus undulatus (fence lizard): 121937175
Help
Entry
121937175 CDS
T07740
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121937175 (CHD5)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121937175 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
121937175
NCBI-ProteinID:
XP_042336061
LinkDB
All DBs
Position
7:9818845..9851760
Genome browser
AA seq
2007 aa
AA seq
DB search
MRGSQGQGQQHQQQEQEQLSEEEDGILEALEEFYPEEQLKKKKKLKKLKENKASKVKRKK
KEGSLDDEISENEEELELGEKSESEGSDYNPNKKKKKKLKEKKEKKAKRKKKEEEEEENE
DAGLKEPKTSAQLMEEWGLDDVDYAFSEEDYHMLTNYKAFSQFLRPLVAKRNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVAIAPAPMSDGPPQLLPLLPPQPLL
LPLLPPPPAIRKAKTKEGKGPGVRKKIKSTKESKKKGKGGKKTGSLKFRFGGIANKRKKG
SSSEEEEQEESDLDSASIHSVSVRSEASFGLAKKGKKRKKKKKIEEGDGYETDHQDYCEV
CQQGGEIILCDTCPRAYHLVCLDPEMEKAPEGKWSCPHCEKEGIQWEPKDEEDEEEDLGE
EADDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQ
RILHWKWKETPPPALIPEDPQLVTPPPLKPLREVLPEREFFVKWAGLSYWHCSWVQELQL
ELYHTVMFRNYQRKNDMDDPPAFDYGSGDEDSKIEKRKNKDPDYAKMEESFYRYGIKPEW
MMIHRILNHSFDKKGDVHYLIKWKDLPYDQGTWEGDEIDIPYYENFKQLYWNHREMMLGE
ESIQVSKRLSPKEKKPGEEKAERPPETPLVDPTVKFDKQPWYIDTTGGTLHPYQLEGLNW
LRFSWAQGTDTILADEMGLGKTVQTIVYLYSLYKEGHSKGPYLVSAPLSTIINWEREFEM
WAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELIT
IDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLL
NFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV
ELSQMQKKYYKLILTRNFEALNSKGGGSQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLP
NGSYDGSSLVKSSGKLMLLQKMMKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERI
DGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQA
FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELD
DILKFGTEELFKDDVEAMMSQAQRIVMPEVVSPFAEASASKGGAATPGLKKKHGGPPPGD
NKDVEDISVIHYDDAAISKLLDRNQDASDDTELQNMNEYLSSFKVAQYVVREEDGVEEVE
REIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDASQEDQEWHDEL
SDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFN
ARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAET
FADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEPVNGKYSTPDLIPEGLEMKKSSELPSS
DPNTPIPASPAHGQAATMTQPVSDKAEMQPGVPEDKEQTESWTKKENQVTASGDKMEEKE
ETQAKAGEENAVEEEEAERTDATPEKPEQDPTDETVQENETSVEKPDQSTSPCKGGAKET
KPEEAKEEEKELTEVQQNGEKEDEEDGKKDDKSGIRFMFNIADGGFTELHTLWQNEERAA
VSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKN
KFLARRFKLLEQALVIEEQLRRAAYLNMTQEPNHPAMALNARLAEVECLAESHQHLSKES
LAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNR
GSDPSVQQASFGSSQIYSNNFGPNFRGPGPGGLINYSQMPLGPYVTAIPNGLPPSRTDKK
TPESPKDGSALDCEGRRRHHNVICIED
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggaagccaaggccaggggcagcagcaccagcagcaggagcaggagcagctctcc
gaagaagaggatggcatcctggaggccctggaggagttttacccggaggagcagctgaag
aagaagaagaagctgaagaagctgaaggagaacaaggcttccaaagtcaagaggaagaag
aaagaggggagtcttgatgatgaaatctctgaaaacgaagaagaactggagctgggagag
aagtcggagagtgaaggcagtgactacaaccccaacaagaaaaagaagaagaagctgaaa
gagaagaaggagaaaaaggccaagcggaagaagaaagaggaggaagaggaggagaacgaa
gacgcgggattgaaggagcccaagacctctgcgcagctgatggaggagtggggcttggat
gacgttgactacgctttttccgaagaggactatcacatgttgaccaactacaaggctttc
agccagtttctgagacccctggttgccaagaggaaccccaaaatccccatgtccaagatg
atgaccgtcttgggggccaagtggagagagttcagtgctaacaaccctttcaaaggcagc
tctgctgcggccgctgcggctgctgtggccgcggcagtggagacggtcgccattgcgcca
gccccgatgtctgacggccccccgcaacttctgcccctcctgccaccgcagccgctactt
ctgccattactgccccctccgccggccatcaggaaagccaagaccaaggagggcaaaggt
cccggcgtccggaagaagatcaagagcaccaaagagagcaagaagaaggggaaagggggg
aagaagacggggtccctcaaattccgttttggggggatcgccaacaagcggaaaaaaggg
tcttcgagcgaggaggaagaacaagaggagtcggacttggacagtgccagcatccatagc
gtctctgtccgctccgaggcctcctttggtttggccaagaagggaaagaagaggaagaag
aaaaagaaaatcgaagaaggcgatggatacgagacggaccaccaggattactgcgaggtg
tgccagcagggtggggaaatcattctgtgcgacacctgcccccgggcataccaccttgtc
tgcctggaccctgagatggagaaggcccctgagggcaaatggagctgtccacactgcgag
aaagagggcatccagtgggagccgaaagacgaggaggacgaggaggaagaccttggcgag
gaggcggacgaccacatggagttctgccgggtctgcaaagatggcggggagctcctttgc
tgcgacacatgtccatcctcctatcacctccactgcctcaacccgccactgccggaaatc
ccaaacggtgaatggctctgcccccgttgtacatgtccgccgttgaaaggcaaagtccag
cggatcctccactggaaatggaaggagactccacctccggctttgatcccggaggatccc
cagttggtcactccaccgcccctgaagcctcttcgggaagtcctccccgagcgggaattc
tttgtgaaatgggccggactctcctactggcattgctcctgggtccaagagctgcagctg
gagctttaccacactgtgatgttccggaactaccaaaggaaaaacgacatggacgatccg
ccggcctttgactacggttccggcgatgaggacagcaaaattgagaagcggaagaacaag
gaccccgattacgccaagatggaggagagtttctatcgctacgggatcaagcccgagtgg
atgatgattcaccggatcctcaaccacagcttcgacaagaagggagacgtccattacttg
atcaagtggaaggacctgccctacgaccaaggcacctgggaaggggacgagatcgacatc
ccttactatgagaacttcaagcagctctactggaaccacagggagatgatgctgggggaa
gagagcatccaggtgtccaaaaggctgagtccgaaagagaagaaaccaggcgaggagaaa
gccgagcgtccaccagaaacgcctcttgtggatccgacggtaaaattcgacaagcagcca
tggtacatcgacacgaccggtgggacgctgcacccataccaactggaagggctgaactgg
ctccggttctcctgggcccaagggacagacaccatcctggccgacgagatgggtctgggc
aagaccgtccagactattgtgtacctttattccctttacaaagagggccactccaaaggg
ccctacttggtcagcgccccgctttcaaccatcatcaactgggaacgtgagttcgagatg
tgggcgcccgacttctatgtggtcacctacaccggggacaaggagagccggtcggtcatc
cgcgagaacgagttctccttcgaggacaacgccatccggagcgggaaaaaagtctttcgg
atgaagaaggaagcccagatcaagttccacgtcctcctgacctcctacgaactcatcacc
atcgaccaggccatcctggggtccattgagtgggcttgcttggtggtggatgaagcccac
cggctgaagaacaaccagtccaaatttttcagggtcctcaacagctacaagatcgactac
aagctgctcttgaccgggacgcctctccaaaacaacctggaggagcttttccatttgctc
aacttcctcactccagagaggttcaacaacctggaaggattcctggaggagtttgcagac
atctccaaggaggaccagatcaagaagctccatgatctcctggggcctcacatgctccgg
cggctgaaggccgacgtcttcaagaacatgccagccaagacggagctcattgtccgagtg
gagctcagccagatgcagaagaaatactacaagttaatcctgaccaggaactttgaggcc
ctgaattcgaaaggcggtggcagccaagtgtccctcctcaacatcatgatggatctgaag
aagtgttgcaaccacccctaccttttcccggtggccgctgtggaagccccggttttgcca
aacggctcctatgatgggagctcccttgtgaagtcctctgggaagctcatgctcttgcag
aagatgatgaagaagctgcgggacggaggtcaccgggtgctcatattctcccagatgacg
aagatgcttgacctcctggaggatttcttggagtacgaaggctacaagtatgagcggatc
gacggcgggatcacgggaggactgcggcaagaagccattgacaggtttaatgccccagga
gcgcagcagttctgtttccttctttccacccgtgccggcggtttgggcatcaacctcgca
acggctgacacggtcatcatttacgattctgactggaatcctcacaatgatatacaggcg
ttcagcagagctcaccgcatcggccagaacaagaaagtgatgatctaccgctttgtgacg
cgggcctccgtcgaggagcgcatcacccaagtggccaagcgcaagatgatgctcacccac
ctggtggtgcgcccgggtttgggttcaaagtctggctccatgaccaagcaagagctggac
gacatcctcaagtttgggacggaggagctattcaaggatgacgtggaggccatgatgtct
caggcccaacggattgtcatgccggaggtggtgagcccttttgcggaggcatcggcttcg
aaaggaggagcagcgactcctgggttgaagaaaaagcacggcggccctcctccaggggac
aacaaggacgtggaggacatcagcgtgatccactacgacgacgcggccatctccaagctc
ttggaccgcaaccaggacgccagcgacgacacggagctccagaacatgaacgagtatctc
agctcttttaaagtggcccagtatgttgtgagagaagaggacggtgtggaagaagttgag
cgagagattatcaagcaagaggagaatgtggatcccgactattgggaaaagctcttgagg
catcactacgaacagcagcaagaagatctcgcccgcaacctcgggaaagggaagcgcgtc
cggaagcaggtcaactacaacgacgcctcccaagaggaccaagagtggcatgacgagctt
tcggacaaccagtcggagtactccattggctccgaagatgaggacgaagactttgaggag
cggcctgaaggtcagagtggccggagacaatcccggaggcaactgaagagtgaccgggac
aagccccttcctccattgttggcaagagttggcgggaacattgaggtgctgggtttcaac
gcccgccaacggaaagccttcctgaacgccatcatgaggtgggggatgcctccgcaggac
gccttcaactcccattggctggtgagggacctgcgcgggaaaagcgagaaggagttcaga
gcgtacgtgtccctgttcatgcgccatttgtgcgaaccgggcgcggatggcgctgagacc
tttgcggatggcgtcccccgtgaagggctgtcccgccagcatgtcctgacgcgcatcggc
gtgatgtccctggtcaggaagaaggtccaagagtttgaacctgtgaatgggaaatatagc
actccagacctcatcccagaaggcctggagatgaagaagtccagcgaactgccctcttcg
gacccaaacactcccattccggccagtccagctcatggtcaagcggccaccatgacgcag
ccagtttcagacaaagcagaaatgcagccaggggttcctgaggataaggagcaaactgaa
tcttggaccaagaaggagaaccaggtgacggcgagcggagacaagatggaagagaaggag
gagacccaagcgaaagcgggtgaggagaacgccgtggaggaggaggaggcagagaggaca
gacgccacgccggagaagccggagcaagatccaacagatgaaaccgtccaggagaatgag
acgtctgtggagaagcctgaccaaagtaccagtccttgcaaaggtggtgcgaaagaaacc
aagccagaagaggcaaaggaagaagagaaggagctgacagaggttcagcaaaatggtgaa
aaagaggacgaggaagatgggaagaaggacgacaagagcgggatccgattcatgttcaac
attgcggatgggggcttcacagagctgcacacgctttggcagaatgaggagagggcagcc
gtctcctcggggaagatctacgatatttggcaccggcggcatgattactggctcctggcg
ggcatcgtcacccatggctatgcccgctggcaggacatccagaacgacccgcgttacgtg
atcctgaatgagcccttcaagtcagagatccacaagggcaactacctggagatgaagaac
aagttcttggctcggcgtttcaagttgctggagcaggcgctggtcatcgaggagcaactc
cgtcgggctgcgtacctcaacatgacccaagagcccaaccacccagccatggccttgaat
gcccgcctggccgaagtggagtgccttgctgagagccaccagcatctctccaaagagtct
ctcgctgggaacaagcccgccaatgctgtccttcataaagtcctaaaccagctggaagag
ctcctgagtgacatgaaggccgacgtgacgcggctcccctccatgttgtcccgcatcccg
cccgttgccgctcgcctccaaatgtccgagaggagcattctcagccgcctgacgaaccgg
ggcagcgaccccagcgtccagcaggcttcctttggttcctcccagatctatagcaacaac
tttgggcccaatttccgaggtccgggacccggggggctcataaactacagccagatgccc
ctgggaccttatgtgacggcgatacccaacgggctgcctccaagccggacggataaaaag
acccccgagtccccgaaggacggctcggccttggactgcgagggccgccgtcggcatcac
aacgtcatctgcatcgaagactga
DBGET
integrated database retrieval system
