Sceloporus undulatus (fence lizard): 121937256
Help
Entry
121937256 CDS
T07740
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121937256 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121937256 (PRPF4)
Spliceosome [BR:
sund03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121937256 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
WD40_like
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
121937256
NCBI-ProteinID:
XP_042336225
LinkDB
All DBs
Position
7:18200560..18208931
Genome browser
AA seq
520 aa
AA seq
DB search
MAASRGPALGKTKASDDGDGPPAKKGPIFYGSLEEKERERILKGESGMMGKDAVKAAIEA
GNINVTSGEVFDLEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLF
GEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKTKEEYQQTWYHEGPNTLKTARLWIA
NYSLPRAVNRLDEARLLKEVPEATRTSQKQELHKSLRSLNNFCSQIGDDRPISFCHFSPN
SKLLATACWSGLCKLWSVPDCNLIHTLRGHNTNVGAIVFHPKATVSLDKKDVNLASCAAD
GSVKLWSLESDEPVADIEGHTVRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQE
GHSKGVYDIAFHVDGSLSGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI
ATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKVWTHPGW
SPLKTLAGHEGKVMGLDISQDGQLIATCSYDRTFKLWMAE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcgaggggcccagcactgggaaagacaaaggcttcggatgacggagatggc
cctcctgccaagaagggccccattttctatgggagcctggaggagaaggagcgtgagcgc
atcctcaaaggggagtccgggatgatgggcaaggatgcggtcaaggcggcgattgaagcc
ggaaacatcaatgtcaccagcggcgaggtttttgacctggaggagcacatcagcgagcgt
caggcagaagtactggcagagtttgagcgcaggaagcgggccaggcaaatcaacgtttcc
acagatgactcagaggtcaaggcctgcttgcgagcccttggagaacccatcaccctgttt
ggagaggggcctgcagaaaggagagaaaggctaaggaatattctctcagtggttggcaca
gatgcattgaagaaaaccaaaaaagacgacgagaagtccaagaaaaccaaagaggagtat
cagcaaacctggtaccacgaaggaccaaatacactgaagactgccaggctgtggatcgca
aactactcactccctcgggcagtaaatcgattggatgaagcccggttgctcaaggaggtc
cctgaagccacacggacatcccagaaacaagaactgcacaaatctctgaggtctttgaat
aatttctgtagccagatcggagatgaccgccccatttctttctgccacttcagccccaac
tcaaagcttctggctacagcctgttggagtggcctctgcaagctgtggtcagtgccagac
tgcaatctcatccacactttgcgaggacacaacacaaatgttggggcaattgtcttccat
ccgaaagcaactgtctccttggacaagaaggatgtgaacttggcctcttgtgcagctgac
ggctctgtcaagctctggagtcttgaaagcgatgaaccagtggctgacatcgaagggcac
acggttagagtggcacgggtagcatggcatccttcaggcagatttttgggtaccacctgc
tatgaccactcatggcggttgtgggacctggaggcccaagaggagattctgcaccaggag
ggccacagcaaaggagtctatgacattgccttccatgttgatggttccctttctggcact
ggtggccttgatgcatttggccgtgtgtgggacctacgcactgggcgctgtatcatgttt
ttggaaggtcatctcaaagagatctatggaattaatttttccccaaatgggtatcacatc
gccactggcagtggtgacaacacttgtaaagtgtgggatctccgccagaggaaatgcatc
tataccatccctgcccatcagaacctggtgacaggggttaagtttgaaccaaatcatggc
aacttcctgctcactggagcctatgacaacacagcaaaggtctggacacaccctggctgg
tcccctttgaaaaccttggcagggcacgagggcaaagtgatgggtttggatatctcccag
gatggccagctgattgcaacatgctcttacgaccgaacctttaagctttggatggcagag
taa
DBGET
integrated database retrieval system
