| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase beta' chain
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| KO |
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| Organism |
suo Streptococcus suis SS12 (serotype 1/2)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:suo00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSU12_0122 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:suo03021]
SSU12_0122 (rpoC)
03400 DNA repair and recombination proteins [BR:suo03400]
SSU12_0122 (rpoC)
Enzymes [BR:suo01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSU12_0122 (rpoC)
Transcription machinery [BR:suo03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSU12_0122 (rpoC)
DNA repair and recombination proteins [BR:suo03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSU12_0122 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
114750..118397
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| AA seq |
1215 aa
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPERDGLFDEVIFGPTKDWEC
SCGKYKRIRYKGITCDRCGVEVTRAKVRRERMGHIELKAPISHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGYGSFVAKMGAEAIQDLL
KQVDLPKEIAALKEELKTASGQKRIKAVRRLDVLDAFYKSGNKPEWMILNILPVIPPDLR
PMVQLDGGRFAASDLNELYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIAGNVKAAKRLIERGDDRIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMVFKDADEAVMAYRNGYVHLHTRVGI
ATDSLDKPWKDNQKHKVMMTTVGKILFNAIMPEGLPYLQEPNNANLTEGTPDKYFLEPGS
DIKAAIAELPINPPFKKKNLGNIIAEIFKRFRTTETSALLDRLKDLGYYHSTLAGLTVGI
ADIPVIDNKAEIIEESHERVEQIKKQFRRGMITDDERYAAVTDEWRSAKEKLEKRLVEKQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMSAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLDIRSITDGKEMIEPLE
ERLQGRYTKKTVKHPETGAVIIGPNQLITEDIAREIVNAGVEQVTIRSVFTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNSDITQGLPRVQEI
FEARNPKGEAVITEVKGEVIAIEEDASTRTKKVFVKGKTGEGEYVVPFTARMKVEVGDQV
ARGAALTEGSIQPKRLLEVRDVLAVETYLLSEVQKVYRSQGVEIGDKHIEVMVRQMLRKV
RVMDPGDTDLLMGTLMDITDFTDANAEVVIAGGIPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKRDNLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIEDTV
AEELAAEAELEAVTE |
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| NT seq |
3648 nt +upstreamnt +downstreamnt
gtggttgacgtaaatcgatttaaaagtatgcaaatcacgttagcttcaccaagtaaggtt
cgttcatggtcttacggtgaggttaaaaaacctgaaacaatcaactatcgtacacttaaa
ccagaacgtgatggactttttgacgaagtcatcttcggtccaacaaaagactgggagtgt
tcatgtggtaaatacaagcgtatccgttataaagggattacttgtgaccgctgtggtgta
gaagtgactcgtgcaaaagtacgtcgtgaacgtatgggacacattgagttgaaagcacca
atttcacacatttggtatttcaaaggtattccaagtcgtatgggcttgaccttggatatg
agcccacgtgcgcttgaggaagttatctacttcgcagcttacgtggtgatcgatccgaaa
gatacaccgcttgagcacaagtcaatcatgacagagcgcgaataccgtgagcgtttgcgt
gaatatggttatggttcattcgttgccaaaatgggtgcagaagcgatccaagacctcttg
aaacaagtcgatcttccaaaagaaatcgcagctttgaaagaagaattgaaaacagcttct
ggtcaaaaacgcattaaagcagttcgccgcttggatgtattggatgctttctataaatct
ggtaacaagcctgagtggatgattctcaatatccttccagttattccaccagatttgcgt
ccgatggttcagttggatggtggccgttttgccgcatctgacttgaacgaactctaccgc
cgtgttatcaaccgtaacaaccgtttggctcgtctcttggaacttaatgctccaggtatc
atcgtacaaaacgaaaaacggatgctccaagaagctgtggatgctttgattgacaacggt
cgccgtggtcgtccaattacaggaccaggtagccgtccacttaaatcactcagccacatg
cttaaaggtaagcaaggacgattccgtcaaaacttgcttggtaagcgtgttgacttctca
ggccgttccgttatcgccgttggtccaactcttaaaatgtaccaatgtggtgtaccacgt
gaaatggctatcgagctcttcaaaccgtttgtcatgcgcgaaatcgttgcccgtgatatt
gctggaaacgtaaaagctgcaaaacgtttgattgagcgtggtgatgatcgtatttgggat
atcttggaagaagtgatcaaagaacacccagttcttttgaaccgcgcacctacccttcac
cgtttgggtatccaggcttttgagccagttctaatcgacggtaaagcccttcgtttgcac
ccgcttgtctgtgaagcctacaacgccgactttgacggtgaccagatggcgattcacgtt
ccattgtcagaagaagcacaagcagaagcacgtatccttatgcttgcggcagaacacatc
cttaaccctaaagatggtaaacctgtcgtaacaccatctcaggatatggttttgggtaac
tactacttgaccatggaagatgctggtcgtgaaggtgaaggtatggtcttcaaggatgcg
gatgaggctgttatggcttaccgcaatggctatgttcacttgcatactcgtgttggtatc
gcaacagatagcctcgataaaccttggaaagacaaccaaaaacacaaggtcatgatgaca
actgtcggaaaaatcttgttcaacgcaattatgccagaaggtcttccatacttgcaagag
ccaaacaatgctaacttgacagaaggaactcctgataaatacttcttggaaccaggatca
gatattaaggctgccattgcagaattgccaatcaacccaccattcaagaagaaaaatctt
ggtaacatcatcgctgaaatcttcaagcgtttccgtacaactgaaacatcagcccttctt
gaccgtttgaaagacttgggttattatcactcaacactcgctggtttgacagtgggtatt
gccgatatcccagttatcgacaacaaggctgaaatcattgaagaatctcacgaacgtgta
gaacaaatcaagaaacaattccgtcgtggtatgattactgacgatgagcgctatgcagct
gttacagatgaatggcgttcagctaaggaaaaattggaaaaacgcctggttgaaaaacaa
gatcctaagaacccaatcgttatgatgatggactctggtgcccgtggtaacatctccaac
ttctcccagttggccggtatgcgtggtctgatgtcagctccgaacggacgtatcatggaa
ttgccaatcttgtctaacttccgtgaaggtctttcagtattggaaatgttcttctcaact
cacggtgcccgtaagggtatgacggatacggccttgaagacagccgactcaggttacttg
actcgtcgtttggttgacgttgcccaagacgttattatccgtgaagacgactgtggaaca
gaccgtggtcttgacatccgttcaatcacagatggcaaggaaatgatcgagccacttgaa
gagcgtttgcaaggtcgttacactaagaaaactgttaaacatcctgaaacgggtgccgtt
atcattggtccaaaccaattgattacggaagatattgcccgtgaaattgtcaatgcaggt
gttgaacaagtaaccatccgtagcgtatttacatgtaacactcgtcacggtgtctgccgt
cattgttatggtatcaacttggcgacaggtgatgcggttgaagtgggtgaagcagttggt
acaatcgctgcccaatcgatcggtgagcctggtacacagcttacaatgcgtaccttccac
acgggtggtgtagcctcaaacagcgatattacgcagggtcttcctcgtgtccaagagatc
tttgaagcccgtaacccgaaaggggaagcggttatcactgaggttaaaggtgaagttatc
gctattgaagaagatgcttctactcgtaccaagaaagtctttgttaaaggtaaaactggc
gaaggcgaatatgtggttccatttacagcccgtatgaaggttgaagttggggaccaagtc
gcgcgtggagcagcccttaccgaaggttctatccaaccaaaacgcttgcttgaagtccgt
gatgtcttggcggttgaaacttaccttctttctgaagttcaaaaagtttaccgtagccag
ggtgtagaaatcggcgacaagcacatcgaggtaatggttcgtcaaatgcttcgtaaagtt
cgtgtcatggatccaggtgacacagatcttctcatgggtaccctcatggatatcacagac
tttacagatgccaatgcggaagtggttattgcgggtggtattccggcaacagctcgtcca
gttcttatgggtatcacgaaggcttcccttgaaaccaactcattcttgtctgccgcatcc
ttccaagaaacaactcgcgttcttacagatgcagctattcgtggtaaacgtgacaacctt
ctcggtcttaaagagaacgttatcatcggtaagattatcccagcaggtacaggtatggcc
cgctaccgtaatcttgaaccacaagccatcaatgaagttgaaatcattgaagacacagta
gcagaagagcttgctgcagaagcagagcttgaagctgtaactgaataa |
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