Streptococcus suis SS12 (serotype 1/2): SSU12_0488
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Entry
SSU12_0488 CDS
T02025
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
suo
Streptococcus suis SS12 (serotype 1/2)
Brite
KEGG Orthology (KO) [BR:
suo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suo03021
]
SSU12_0488
Transcription machinery [BR:
suo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SSU12_0488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
UPF0122
Sigma70_ECF
TetR_C_15
L_biotic_typeA
Nudix_N
Motif
Other DBs
NCBI-ProteinID:
AER14679
LinkDB
All DBs
Position
513166..513669
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AA seq
167 aa
AA seq
DB search
MSIKLDQYEKEVIGIAEEISYYLQKSGANYADSQDIAQDILVKILEAELVLPFEKLRAWL
YRSAVRAYIDKYRRDKRYHEILQKEFFTPENFLVYDQEDYEELYQAVADLPEKYQQVIDL
YYFQDMSIKEIAHILGAGQSWVKISLHRGRKQLRKILEERGYDYEDF
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaaacttgatcaatatgaaaaagaagtcattggtattgctgaggagatttcc
tactatctacaaaaatctggcgccaactatgcagatagtcaggacatcgcacaggatata
ctagtgaaaattttagaagcagagcttgtccttcctttcgaaaaactaagagcttggctt
taccgttctgcagttcgggcttacattgacaaatacaggcgagacaagcgctaccatgaa
attttacaaaaggagttttttacacctgaaaattttttggtctatgaccaagaagattat
gaggaactctatcaagctgttgcagacctgccagaaaaataccagcaagtgattgactta
tactacttccaagatatgagtatcaaagagattgcgcatattttaggtgctggtcaaagt
tgggtgaaaatcagccttcaccgaggacgcaagcagttaaggaaaatactagaagagaga
ggatatgactatgaagacttttga
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