Streptococcus suis S735 (serotype 2): YYK_00960
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Entry
YYK_00960 CDS
T02214
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sup
Streptococcus suis S735 (serotype 2)
Pathway
sup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YYK_00960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sup03400
]
YYK_00960
Enzymes [BR:
sup01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
YYK_00960
DNA repair and recombination proteins [BR:
sup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YYK_00960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_12
UvrD-helicase
Herpes_Helicase
SLFN-g3_helicase
DEAD
AAA_22
AAA_28
UvrD_C
5_3_exonuc
T2SSE
NPHP3_N
AAA_29
nSTAND3
AAA
HHH
Motif
Other DBs
NCBI-ProteinID:
AFQ99712
LinkDB
All DBs
Position
complement(207033..209522)
Genome browser
AA seq
829 aa
AA seq
DB search
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYG
NLVTHPKYGQQLQISRYERSKPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKIL
AEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEYGIPNKLAFQIQDQYKEKTLQ
IIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHTNL
TRLMGKNGFKPFPRADVEAAIAELESISSLTYDNIQKEAIVQAITNPLFILTGGPGTGKT
TVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRATRRMNELTGLPSATIHRHLGLVEG
QEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPA
LIERIVGAAIKSGIPANEVQILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAF
RQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDEITINFDGSEVTYPRNEWYKI
TLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQESKESLIKKDESKTATTTQTQPPTQPDRKEQVKVVKEN
NQQLSLLDQDQPEKTSPQPTEYILTVDNLLTIDPMIGIEQADIEEFFKA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtgtattttaccggtactattgaccggattatttttgaaaatcctagtaat
ttttataaaatccttctccttgaaatcgaggagacagacgcagactatgatgactacgaa
attattgtgaccggaacgattgccgatgtcattgaaggagaagactatcgtttctatggc
aatctggtcacccatcccaagtatggtcagcagctgcaaatttcgcgttacgaacgcagc
aagcctacctcagctggtctggtcaagtatttctccagcgagcatttcaagggaattgga
cgcaaaacagctgaaaaaatcgttgagctctatggcgaagataccattgataagatttta
gctgaacctgaaaaactaacccaaatcacaggcctatccagcaagaacatgcaggcattt
gtcgaaaaactccgcctcaattatggaaccgagttgatcttggcaaaactagccgagtat
ggcattcccaataaattggcctttcaaatccaagaccagtataaggaaaaaacacttcag
attattgaagaaaatccctatcaactggtcgaagatgtccaggggctcggctttaccatt
gccgataggattgcggaaaatctaggaattgccagtgattcaccccaacgttttcgggct
ggcatgctctttagtctcattcatcgctccatggaaacaggcgatacctatgtggaggcc
agagacttgctggaagcaacccttgaactgctggaaaaatcccgccatacagagctggac
cccgctgctgttgccaaagaattgacgggactgattgcagacgacaaggtacagcaagaa
ggcacaaagatttttgacaacagcctctactttgccgaacatggtatccatacaaaccta
actcgcctgatgggaaaaaacggcttcaagcccttcccacgcgcagacgtcgaggctgcc
atagcagagctggaaagcatatcttctctcacctacgataacattcaaaaagaagccatt
gtccaagccattaccaatccgcttttcattctgacaggcgggccagggactggaaaaaca
acggttatcaacggcattatcgcagtctatgctatcttgcataagattgacctgacgcga
aaccgagaagaatgcccagtcctcctagccgctccaactggacgagcaaccagacggatg
aatgaattgacagggctgccttccgccaccatccaccgccatctcggtctggtagaagga
caggaggaatcctaccgtgatgattatttggatgccgactttatcatcgtggatgagttt
tctatggtagatacttggttggcaaaccagctcttccagaatatctcctcccagacccaa
gttctgattgtcggcgatgccgagcaattgccttctgtcagccccggtcaagtacttgct
gacctcttgaaaattgacaagctgcccagcattactctagaacgtatctatcgtcaatcc
gatgattcgaccattgttaccctagccagccagattcgacagggtgctctgcctagcgat
tttcgtgagaaaaaggctgaccgttcctattttgaagcccagaatgaacaaattccagcc
ctgattgagcgcattgtcggcgcagccatcaagtcaggtattcctgcaaacgaggtacag
atcctcgctcccatgtaccgtggggccgcaggcatcgaccaactcaacactatgacccag
gccctgctcaatccactggaagagggagagttagaattcctgcataacgagcaagccttc
cgccaaggcgaccgggtcattcatttagtcaacgatgccgaggccaatgtcttcaatggt
gatttaggctacatcaccgacctccttcctgccaagtacaccgactccaagcaggacgaa
attaccatcaacttcgacggtagcgaggtcacctatccccgaaacgaatggtacaagatt
accctggcctatgccatgtccatccacaagtcccaaggcagcgagtttcaggtagtcatc
ctccccatcacccgcaccagccaccgtatgctccagcgcaatctggtctacaccgccatc
acccgctccaagagcaagctcatcctcctgggcgaaatctccgccttcgactacgccgtc
aaaaacgccggcaccgtccgaaaaacctatctggtcccacgtttccaaggggaaatggca
gagcaggaaagcaaggaaagcctgattaaaaaagacgaaagcaaaacagctacaaccacg
caaacccagccccctactcagccagacagaaaagaacaggttaaagtagtcaaagaaaac
aaccaacaactctcccttcttgatcaagaccagccagaaaaaacaagtccccaacccaca
gaatacattttgactgtagacaacctactaaccatcgaccccatgattggcatagaacag
gcagatattgaagaattttttaaagcataa
DBGET
integrated database retrieval system
