Streptococcus suis S735 (serotype 2): YYK_06260
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Entry
YYK_06260 CDS
T02214
Name
(GenBank) beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sup
Streptococcus suis S735 (serotype 2)
Pathway
sup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YYK_06260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sup03019
]
YYK_06260
Messenger RNA biogenesis [BR:
sup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YYK_06260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
SUFBD_core
Motif
Other DBs
NCBI-ProteinID:
AFR00765
LinkDB
All DBs
Position
complement(1316782..1318443)
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AA seq
553 aa
AA seq
DB search
MSTIKIMALGGVRENGKNLYIAEVNEHIFVLDAGAKYPENEQLGVDVVVPNFDYLEENKH
RVAGVFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELAKLLVKGNNATKKFNDFHVINA
ETEIDFGDSVVSFFQTTHSIPESLGIVVKTDEGNIVYTGDFKFDQAADKFYRTDFGRLAE
IGNEGVLALLSDSANADSNVQVASMHEAGEEILNTIADCDGRVIVAAVASNIVRIQQIFD
AAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERLLVKPKDMNKYEDHELIILETGRMG
EPLNGLRKMSIGRHRYVEIKEGDLVYIVTTPSISKEAVVARVENLIYKAGGTVKSITKNL
RVSGHGNARDLQLMLNIMKPKYLFPVQGEYRQLDAHAKAALEIGMYPENIIIVKRGDVMA
FEEGDFVHSGAVPAGDVMIDGNAMGDVGNIVLRDRKILSEDGIFIVAITVNRREKKIISK
AKVNTRGFVYVKKSKDILREASELVNTTVENYFTKDSFDWAELKSAVRDDLAKFLFDQTK
RRPAILPVIMEVK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaattaaaattatggctcttgggggtgtgcgggaaaatggaaaaaacctgtac
attgccgaagtgaatgaacatatttttgttttggatgcaggggcaaagtatcctgagaat
gaacagttaggtgtggatgtagtcgtcccaaatttcgattatttggaagaaaataagcat
cgtgtagcaggggtctttttatctcacgggcatgcagatgctatcggagcgcttccttat
ctcttggagaaagtgaaagtgccagtatttggttcgcacttgactatcgaattggctaag
ctacttgtcaaggggaataatgctactaagaaatttaatgatttccatgttatcaatgct
gaaacggaaattgatttcggggattcagtggtatctttctttcagacgacccactctatt
ccagagagtttaggaattgtcgttaagacggatgaaggaaatattgtctacacaggtgac
tttaagtttgaccaggcggcagataagttttatcgtacggattttgggcgattggctgaa
atcggtaacgaaggtgtgttggccctcttgtcagactcagctaatgcagatagcaatgtt
caagtagcgagcatgcatgaggctggggaggaaattctcaatacgattgctgactgtgac
gggcgtgttattgtggcagcagttgccagcaatattgtacgtattcaacagatttttgac
gcggcagaagcaactggtcgtcgtgtcgtattgacaggacatgatgtggaaaacattgtc
cgaacagcgattcaattgaaaaaacttcgtttggtcagcgaacgcttgttggtaaaacca
aaggatatgaacaagtatgaagaccatgaattgattattttagaaactggtcgtatgggc
gagccgttaaatggattgcgtaaaatgtctatcggtagacatcgctatgttgaaatcaaa
gaaggtgatctagtttatattgttaccactccaagtatttcaaaagaagcggttgttgct
cgtgtggagaacttgatttacaaggctggtggtaccgtaaaatctatcacaaagaatctt
cgcgtctctgggcatgggaatgcgcgtgatttgcagctcatgctcaacatcatgaagcct
aaatatcttttcccagttcaaggggagtatcgtcaattggatgctcacgctaaggctgcg
cttgaaatcggtatgtatccagaaaacattatcatcgttaagcgtggggatgtcatggct
tttgaagagggggattttgtccatagcggagcggttccggctggtgatgtcatgattgac
ggaaatgccatgggcgatgttggaaatatcgtccttcgtgaccgtaagatcctctcagaa
gacggtatctttatcgtggctatcactgtcaaccgccgtgagaaaaaaatcatttctaaa
gccaaggtcaatactcgtggttttgtctacgtgaaaaagagcaaggacatcttgcgtgag
gcatcagaattggtgaatacaacggtggaaaattactttacaaaggatagctttgactgg
gcagagcttaagagtgctgttcgcgatgatttagcaaaattcctctttgaccaaaccaaa
cgtcgcccagctattttgccggtgattatggaagtcaagtaa
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