Superficieibacter sp. HKU1: P0H77_00635
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Entry
P0H77_00635 CDS
T08896
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe02010
ABC transporters
supe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
P0H77_00635 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P0H77_00635 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
supe02000
]
P0H77_00635 (lsrA)
Transporters [BR:
supe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
P0H77_00635 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_29
RsgA_GTPase
AAA_30
MukB
AAA_23
AAA_27
PhetRS_B1
Motif
Other DBs
NCBI-ProteinID:
WES68549
LinkDB
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Position
128470..130005
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AA seq
511 aa
AA seq
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MQSSHFSAPPLLCVQDIRKHYSGVDVLKGIDFTLHSGEVHALLGGNGAGKSTLMKIIAGI
VPPDGGTMDIAGVRCHHLSPLKAHQSGIYLVPQEPLLFPSLSVQENILFGLRGRQASTEK
MQQLLTALGCQLDPASIAGTLDVADRQIVEIMRGLMRDSQILILDEPTASLTPAETDRLF
TRLRELLKKGVGIVFISHKLPEIRQLADRVSVMRDGKIALAGKTADLSTHDIIQAITPVS
SGVNLSDSQKLWLELPGSRPQNARGATVLTLDDLTGEGFMHISLEVRAGEILGLAGLVGA
GRTELAETLYGIRPVRGGKVMLNGKDISVLSTRQRLQHGLVYLPEDRQSSGLHLDASLAW
NVSSLTHNQRGLWANARRDDAILERYHRALNIKLNDAEQPARTLSGGNQQKVLIAKCLEA
SPQLLIVDEPTRGVDVAARSDIYQLLRSIAGQNVAVLFISSDLEEIEQMADRVYVMHQGE
LGGPALSGSDINVDTIMHVAFGEHHAKEATC
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccagtcatttttcggcacccccactgctttgcgtacaggacatccgtaaacac
tattccggtgttgatgtcctgaagggtatcgactttacgctgcatagcggagaggtgcac
gcgttgcttggtggaaacggggccggaaaatcgacgctgatgaaaatcattgccggtatc
gtgccgcccgatggcggaaccatggatatcgcaggcgtgcgttgccaccatctatctccg
ctcaaagcgcatcagtcaggcatttaccttgtgccgcaggagccgctgctattccccagt
ctgtcggtacaggaaaacattctgtttggtctgcgggggcgtcaggcctcgaccgaaaaa
atgcagcagttgctgacggcgctgggctgccagctcgatccggccagcatcgcaggcacc
ctcgacgtggccgatcggcaaatcgttgagatcatgcgcgggctgatgcgcgattcacaa
attttaatccttgatgagcctaccgcctcgctgacgccagcggaaaccgaccggctgttt
acccgcctgcgtgagttgctgaaaaaaggcgtcggcattgtgtttatctcgcacaagctg
ccggaaattcgtcagcttgccgaccgcgtgagcgtcatgcgcgacggcaaaatcgcgctg
gctggaaaaaccgcggatctctccacccacgatattattcaggcaattaccccggtttcc
agcggtgtaaatctgtccgacagccagaaactgtggctggaactgcccggcagccgtccg
cagaatgcgcggggcgcgacggtgctgacgctggacgatctgaccggcgaaggttttatg
cacatcagtctggaggtccgcgccggggaaattcttggactggccggactggtgggcgcc
gggcgcaccgagctggccgaaacgctttatggcattcgcccggtacggggcggaaaggtc
atgttgaacggcaaagacatcagcgttttatccacgcgccagcgcttacaacacggtctg
gtgtatttgccggaggatcgccagtcgtcaggattacatcttgatgcgtctttggcctgg
aatgtcagctcgctgacccataaccagcgcggcctgtgggccaacgcccggcgcgatgac
gccattctggagcgctatcaccgggcgctgaatatcaaactcaatgatgcagaacagccc
gcgcgcacgctgtccggtggcaatcagcagaaggtgctgattgccaaatgtctggaggcg
tcccctcagctgctgattgtcgatgaacctacacgtggcgtggacgtggcggcccgcagc
gatatttatcagcttctgcgcagtattgccgggcaaaacgtggcggtgctgtttatctcc
tctgatctggaagaaatcgaacagatggccgatcgcgtctacgtcatgcaccagggcgag
cttggcggtcccgcgctctccggcagcgatattaatgtcgataccattatgcacgttgct
tttggcgagcatcacgcgaaggaggcaacatgttga
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