Superficieibacter sp. HKU1: P0H77_05125
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Entry
P0H77_05125 CDS
T08896
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe03030
DNA replication
supe03430
Mismatch repair
supe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P0H77_05125 (dnaE)
03430 Mismatch repair
P0H77_05125 (dnaE)
03440 Homologous recombination
P0H77_05125 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
supe03032
]
P0H77_05125 (dnaE)
03400 DNA repair and recombination proteins [BR:
supe03400
]
P0H77_05125 (dnaE)
Enzymes [BR:
supe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P0H77_05125 (dnaE)
DNA replication proteins [BR:
supe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P0H77_05125 (dnaE)
DNA repair and recombination proteins [BR:
supe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P0H77_05125 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WES69393
LinkDB
All DBs
Position
1064889..1068371
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASSGMPALAITDFMNLCGLVKFYGTAHGA
GIKPIIGADLHVQSELLADEMTQLTVLAMNNIGYQNLTLLISRAYQRGYGPLGPCIDRDW
LVELNEGLILLSGGRLGDVGRSVMRGNNVLVDQCLSFYEAHFPDRFYLELIRTGRQDEEN
YLHAAIKLAEARGLPVVATNDVRFINADDFDAHEIRVAIHDGFTLDDPKRPRNYSTQQYM
RSEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDEAVRKEKRPDYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDEEGRHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINKRREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKSRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCQPWAEHTVLEGERETLGLY
LTGHPINRYLKEIERYVGGLRLKDMHPTERGKMTTAAGLVIASRVMVTKRGNRIGICTLD
DRSGRLEVMLFTEALEKYQHLLENDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRTDARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgttcacctgcgggtgcacagcgactattccatgatcgacggg
ctggcaaaaaccgggccgctggtgaaaaaggcggcctcgtcaggcatgccggcgctggcg
atcaccgattttatgaacctgtgcggtctggtgaagttctacggaacggcgcacggtgcc
ggaattaagcctatcattggtgccgatcttcatgtgcaaagcgagctgctggccgatgaa
atgacccagctgacggtgctggcgatgaacaatattggctaccaaaatctgacgctgtta
atttcccgtgcttatcagcgtggttatggtccgctcggtccgtgcatcgatcgcgactgg
ctggtggaattaaacgaagggctgatcctcctgtccggcgggcgtctgggtgacgtgggc
cgcagcgtgatgcgcggtaataacgtcctggtcgatcagtgtctctctttttatgaagcg
catttcccggatcgtttttatcttgaactgatccgcaccggcagacaggacgaagaaaac
tacctccatgccgccattaagctggctgaagcgcgtggtttgccggtggtggcaaccaat
gatgtgcgttttattaacgcggatgatttcgacgcccatgaaattcgcgttgccatccat
gacggctttacccttgacgatccgaaacggccgcgtaactactcgacgcagcagtatatg
cgtagtgaagaagagatgtgcgagctgttcgccgacatcccggaggcgctggaaaacagc
gtggagatcgccaaacgctgtaatgtcaccgtccgtctcggcgagtatttcctgccgcag
ttcccgaccggcgacatgaccacggaagatttcctggtcatgaaatcgaaagagggcctt
gaagagcgtctggaattcctcttcccggatgaagcggtccgtaaagagaagcgtcctgac
tatgacgagcgcctggatattgaactccaggtgatcaaccagatggggttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacggcgtgccggtaggccct
ggccgtggttctggtgctggctcactggtggcgtacgcgctgaaaatcaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttccttaacccggaacgtgtttctatgccc
gactttgacgtcgacttttgcatggaaaaacgtgatcgggtgattgagcacgtggccgat
atgtacggtcgtgatgcggtttcgcagattattaccttcggtacgatggcggcgaaagcg
gttattcgcgacgtgggccgcgtgctggggcatccgtacggctttgtggaccggatttcc
aaactggtgccgcccgatccgggcatgacgctggcgaaagcgtttgaggccgagccgcag
ctaccggaaatctacgaggctgacgaagaagttaaagcgctgatcgacatggcgcgtaaa
ctggaaggtgtcacgcgtaacgccggtaaacatgccggcggcgtggtgatatcacccacc
aaaattaccgatttcgcgccgctctactgtgatgaagaagggcggcatccggtcacccag
tttgataagaacgacgtagaatacgcaggcctggtcaagtttgacttcctcggtctgcgc
acgcttaccatcatcaactgggcgctggagatgattaacaagcgccgtgagaaaaacggc
gagccgccgctggatatcgccgccatcccgctggatgacaagaaaagtttcgacatgctg
caacgctcggaaaccaccgcggtgttccagcttgaatcgcgcggcatgaaggatctgatc
aagcgtctgcagccggactgcttcgaggatatgatcgccctggtggccctgttccgtccc
ggcccgctccagtcgggaatggtggataactttattgaccgtaagcacgggcgtgaagaa
atctcctatccggatgtgcagtggcagcatgagtgtctgaagccggtactggagccaacc
tacggcattatcctgtatcaggaacaggtcatgcagattgcccaggagctttccggctat
accctcggcggcgcggatatgctgcgccgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcaccttcgaagagggcgcgaagagtcgcggcgtcgacggcgagctg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacgggtttaacaaatcgcac
tccgccgcttatgcgctggtgtcgtatcagacgctgtggctgaaagcgcactacccggcc
gagtttatggcagcggtaatgaccgcggacatggataatacggagaaggtcgtcgggctg
gtggatgagtgctggcggatggggctgaaaatcctgccgccggatattaactccgggctg
tatcattttcacgtcaacgatgacggggaaatcgtgtatggtattggcgcgattaaaggc
gtgggcgaaggtccgattgaagccatcattgaagcgcgtaacaacggcggctatttccgc
gagttgttcgatctctgcgcccgcaccgatactaaaaaactgaatcgccgggtactggaa
aaactgatcatgtccggggcgttcgatcgtctcgggccgcatcgcgcggcgctgatgaat
tcgcttggcgatgcacttaaggccgccgatcagcatgcgaaggcggaagcgattggtcag
gcagatatgtttggcgttctggcggaagagccggagcagatcgagcaatcgtacgccaac
tgtcagccctgggcagaacatacggtactggaaggcgagcgggaaacgttagggttatac
ctgacgggccatccgattaaccggtatctgaaagaaattgagcgttatgtcggcggcctg
aggctaaaagacatgcatccaaccgaacgtggtaagatgaccacggcggcggggctcgtc
attgcttcgcgggttatggtcaccaagcgcggcaatcgcatcggcatctgtacgctggat
gaccgttccgggcggctggaggtgatgttattcaccgaagcgctggaaaaataccagcat
ttgctggaaaacgaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgatggcccgtgaagtgatggacattgacgaagctcgcgaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccatcgctcggggaccattccagtacatctctactatcag
aggacggatgcgcgtgcgcgactgcgctttggcgcaacgtggcgcgtctctccgagcgat
cgtttacttaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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