Superficieibacter sp. HKU1: P0H77_07350
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Entry
P0H77_07350 CDS
T08896
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe03030
DNA replication
supe03430
Mismatch repair
supe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P0H77_07350 (holA)
03430 Mismatch repair
P0H77_07350 (holA)
03440 Homologous recombination
P0H77_07350 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
supe03032
]
P0H77_07350 (holA)
03400 DNA repair and recombination proteins [BR:
supe03400
]
P0H77_07350 (holA)
Enzymes [BR:
supe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P0H77_07350 (holA)
DNA replication proteins [BR:
supe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P0H77_07350 (holA)
DNA repair and recombination proteins [BR:
supe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P0H77_07350 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WES69794
LinkDB
All DBs
Position
complement(1527247..1528278)
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AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLSEGLRAAYLLLGNDPLLVQESQDAVRQAAVAQGFEEYHTFTLDASTD
WNALYSLCQAMSLFASRQTLTLLLPENGPGAPFNEPLSTLVSLLHDDLLLIVRGNKLTKA
QENAPWIAALANRSVLVTCQTPEQAQLPRWLAARAKQNNLQIDDAASQLLCYCYEGNLLA
LAQALERLALLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLAGKSKRALHILHQLQLEA
SEPAILLRTLQRELLMLVNLKRQMAHTPLRSLFDKYRVWQNRRAMVGDALNRLSEDQLRQ
AVTLLSRAELTLKQDYSQSVWTSLESLSLLLCHKALAEIFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttgtacccggaacaactccgcgcgcagctctctgaagggctgcgcgcggcg
tatctgcttctcggaaacgatcctctgctggtacaggaaagccaggacgcggtgcgtcag
gctgccgtcgcgcaagggtttgaggaatatcatacctttacccttgatgccagcaccgac
tggaacgccctctattcactctgtcaggcgatgagtcttttcgccagccgtcagacgctg
acgcttctgctgccggaaaacgggccaggcgctcctttcaatgaaccgctatcgacgttg
gttagcctgttgcatgacgacctgctgctgatcgtgcgcggtaacaaactgacgaaagcg
caggaaaatgcgccgtggatcgccgccctcgccaaccgttcggtgctggtgacctgccag
acgccggagcaggcgcaactgccgcgctggctcgccgcacgcgctaagcagaacaatttg
cagatagacgacgcggccagccagttgctgtgctactgctacgaaggcaatttactggcg
ctggcgcaggcgctggagcggcttgctctgttatggccggacgggaaactgaccctgccg
cgcgtcgagcaggcggtcaacgatgccgcgcactttaccccgttccactgggtcgatgcg
ctactggctggcaaaagcaaacgtgcgctgcatatcctgcatcagcttcagctggaagcc
agcgaaccggcgatcctgctgcgcaccctgcaacgtgaactgctgatgctggtaaacctt
aaacggcagatggcccatacgccgctacgctctctgttcgataaatatcgcgtctggcaa
aaccgccgcgcgatggttggcgacgcgctcaaccgtcttagcgaggatcagctgcgtcag
gcggtaacgctgttaagccgcgccgaactgacgcttaagcaggattacagccagtccgtg
tggaccagccttgaaagcctttctctgctactctgtcataaagcgctggcagagatattc
attgacgggtga
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