Superficieibacter sp. HKU1: P0H77_08100
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Entry
P0H77_08100 CDS
T08896
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0H77_08100 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
supe03019
]
P0H77_08100 (rhlE)
Enzymes [BR:
supe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P0H77_08100 (rhlE)
Messenger RNA biogenesis [BR:
supe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0H77_08100 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WES69924
LinkDB
All DBs
Position
1682592..1683932
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AA seq
446 aa
AA seq
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MSFDTLGLSPEILRAVAEQGYREPTPIQQKAIPAVLEGRDIMASAQTGTGKTAGFTLPLL
QHLTQRAPAKGQRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK
LRGGVDILVATPGRLLDLEHQNAVKLDNIEVLVLDEADRMLDMGFIHDIRRVLAKLPPKR
QNLLFSATFSDDIKGLAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMIG
EGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA
TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE
RLLKKEIPRIALEGYEPDPSIKAEPIQNGRQQQRGGGRGQGGGGRGQQQPRRTDGGAPKG
RGPRSNDGKPAGEKPRRPRPRKPSAV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatacccttggcctgagccctgaaattttgcgcgctgttgcagagcaggga
taccgtgagccgacccccattcagcagaaggcgatccctgccgtgctggaaggccgcgat
attatggccagcgcccagaccgggacgggtaaaaccgccggatttacgctgccgttgctt
cagcaccttacccaacgagcgccggcaaaagggcagcgcccggtgcgcgcgctgatcctg
acgcctacccgcgaactggcggcgcagattggcgaaaacgtccgtgattacagtaagtac
ctcaatattcgttcgctggtggtgtttggcggggtcagcatcaacccgcaaatgatgaaa
ctgcgcggcggcgtagatattctggttgctactcctggccgtctgctggatctggaacat
cagaacgcggttaaattagataacatcgaagtactggtgctggacgaagccgaccgcatg
ctcgacatgggctttatccacgacatccgccgcgtgctggcgaaactgccgccgaagcgt
cagaacctgcttttttccgccaccttctccgacgacatcaaagggctggccgaaaagctg
ctgcgtaacccgctggaaattgaagtggcgcgccgtaataccgcgtctgagcaggtaact
cagcacgtgcatttcgttgataagaaacgcaaacgtgaactgctgtcgcagatgattggc
gaaggtaactggcagcaggtgctggtctttacccgtaccaaacacggcgctaaccacctg
gcggaacagctgaataaagacgggatccgcagcgcggcgatccacggtaataaaagccag
ggtgcacgtacccgggcgctggccgactttaaatccggcgatattcgcgtactggtggct
accgacatcgcggcgcgcggtctggatatcgaagaactgccgcacgtcgtgaactacgag
ctgccgaacgtcccggaagattacgtccaccgtattggtcgtaccgggcgtgcagcggcc
accggcgaagcgctgtcgctggtttgcgttgatgagcataaactgctgcgcgatatcgag
cgcctgctgaaaaaagagatcccgcgtatcgcgctggaaggctacgagccggatccttcg
attaaagcggagcccatccagaatggtcgtcagcagcagcgtggcggcggtcgtggacag
ggcggcggtggccgcggtcaacaacagcctcgtcgcaccgacggcggcgcgccgaaaggc
agaggcccgcgcagcaatgacggcaaaccggccggtgaaaagccgcgtcgtccccgtccg
cgcaaaccttcagcagtataa
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