Superficieibacter sp. HKU1: P0H77_17400
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Entry
P0H77_17400 CDS
T08896
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P0H77_17400 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
supe03400
]
P0H77_17400 (recC)
Enzymes [BR:
supe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P0H77_17400 (recC)
DNA repair and recombination proteins [BR:
supe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P0H77_17400 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WES67379
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Position
complement(3671493..3674861)
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEVVLVQSTGMAQWLQMSLSRRFGIAANI
DFPLPASFIWDMFVRILPDIPGESAFNKQSMSWKLMTLLPELIDGDEFVMLRHYLSDDTD
KRKLFQLASRVADLYDQYLVYRPEWLTRWEAGELVDGLEESQRWQAPLWKALVEHTAALG
QPLWHRANLYQRFIRTLEQASEPPAGLPSRVFICGISALPPVYLQALQALGKHVDVFILF
TNPCRYYWGDIKDPAFLARLVARQRKHHREQRELPLFRDTQQAAGLFNDDGEQDVGNPLL
ASWGKLGRDYMYLLAGLERYDELDAFVDIAPDNLLHNLQYDVLELQNAAVPGRTAEEFVR
SDSKRRLEPDDRSLTIHVCHSPQREVEVLHDRLLAMLEDDPTLTPRDIIVMVADIDSYSP
FIQAVFGSATGDRYLPYAISDRRARQSHPALQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNINEEGLRYLRQWVNESGVRWGMDDDNVRELELPATGQHTWQFGLTRMLLGYAMESH
EGEWRSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQDRPLTEWLPVCREMLNDFFL
PDQDTEAALALIEQQWQAIIEQGTGSHYAEPVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRTLSPLGFDLMSQKPLRGDRSRRDDDRYLFLEAL
MSAEQKLYISYIGRSIQDNSERYPSVLVQELVDYIGQSHYLAGDEDRNCDESEQRVKAHI
MHLHTRMPFDAENFKTDERQSYAREWLAAASQQGEAHSAFIQPLPPLSIDTLPFDQLQRF
WAHPVRAFFQQRLRVNFREEESEIPDAEPFTLEGLTRYQLNQQLLNTLVEEEDADKMFRR
YRAAGQLPYGAFGEIVWDTQLQEMQTLADRVIEHRQPSQSSEIDLQCGGIIITGWLQHVQ
PDGLLRWRPSLLSVSQGMQLWLEHLVYCASGGTGESRLLVRKEGEWRFPPLPAEQARAFL
DDLVAGYLKGMTEPLLLLPESGGAWIKACYDAANDAILRDDETQLKARSKFLQAYEGNMV
VSGEGADIWYQRLWRTLEPEYYEAIIAQAERYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttgatggagttcatt
gtcgagcgtgagcgtcttgacgatcctttcgagcctgaagtcgtgctggttcagagtacc
ggcatggcgcaatggctgcaaatgtccctttcccggcgttttggtattgcggcgaatatc
gactttcccctcccggcgagctttatctgggatatgttcgttcgcatcctgccggacatt
ccgggggaaagcgcgtttaataaacaaagcatgagctggaagctgatgacgctgctgccg
gaactcatcgacggtgatgagtttgtgatgctgcgccactatctcagcgacgacaccgac
aaacgtaaactgtttcagctcgcctcgcgggtggccgatctctacgatcagtatctggtc
taccgcccggaatggctgacccgctgggaagcgggagagctggttgacggtcttgaagag
agtcagcgctggcaggctccgctgtggaaagcgctggtagaacacacggccgcgctgggc
cagccgctgtggcatcgtgctaatttgtatcagcgttttatccgtacgcttgaacaggcc
agcgagccaccggcgggcctgccgtcgcgggtatttatctgcggtatctccgccttaccg
ccggtctatttgcaggcgttgcaggccctcggcaaacacgtcgacgtgtttattctgttc
accaacccgtgccgctactactggggcgatatcaaagacccggccttcctggcgaggctg
gtggcgcgccagcgcaagcatcatcgtgagcagcgtgaactgccgctgtttcgtgatacg
cagcaggcggcgggactatttaatgatgacggcgagcaggacgtcggcaatccgctgttg
gcttcgtggggcaagctcgggcgcgactatatgtatctgctggccggactggagcgctac
gatgagctggatgcgtttgtcgatatcgcgccggataacctgctgcataacctgcaatac
gacgtgctggaattacagaatgcggccgtgccgggcaggacggcagaagagtttgtgcgc
agcgacagtaaacgccggctggagcccgacgaccgcagcctgacgatccacgtctgccac
agcccgcagcgggaagtggaagtgctgcacgatcgcctgctggcgatgctggaggacgac
ccaaccctgacgccgcgcgacatcatcgtgatggtggcggacatcgacagctatagcccg
tttatccaggcggtatttggcagcgcgacgggcgaccgttatctgccttacgccatctcc
gaccgccgtgcccgccagtcacatccggcattgcaggcctttatcagtctgctctctctg
ccggacagccgctttgtgtcggaagacgtgctggcgttgctggacgtcccggtactggcg
gcacgcttcaatatcaatgaagaggggctgcgctacctgcgccagtgggtaaatgagtcc
ggcgtgcgctggggaatggacgatgacaacgtgcgcgagctggagcttcccgctaccggc
cagcacacctggcagtttggcctgacgcgtatgctgctcggctacgccatggagagtcat
gaaggcgagtggcgctcggtgctgccttacgatgagtccagcgggctgatcgccgagctg
gtagggcatctggcatccttgctcatgcaactgaatatctggcgacgtgggctggcgcag
gatcgtccgctgacggaatggcttcccgtgtgccgtgaaatgctcaacgactttttcctg
ccggatcaggataccgaagccgcgctggcgctgattgagcagcagtggcaggcgatcatt
gagcagggcaccggttcgcattacgccgagcctgtgccgctttcgctactgcgcgacgag
ctggcacagcggctggatcaggagcgcatcagccagcgcttcctcgccgggccggtcaat
atctgtaccctgatgccaatgcgctcgattcccttcaaagtggtctgtttgctggggatg
aacgacggggtctatccgcgcacactttcaccgcttggttttgatctgatgagccagaaa
ccgctacgcggcgaccgcagccgtcgcgacgatgaccgctatctgttccttgaggcgtta
atgtcggcagagcaaaaactgtatatcagctatatcggtcgctcgatccaggacaacagc
gagcgttatccgtcggtgctggtacaggagctggtggattatattggccagagccactat
ttagcgggagacgaggaccgcaactgcgacgagagtgaacagcgggtaaaagcccacatc
atgcatctgcatacgcgaatgccgtttgatgccgaaaatttcaaaaccgacgaacgacaa
agttacgcccgggagtggctggcggccgccagtcagcagggcgaggcgcattcggcgttt
attcagccactgccgccgctgagcattgatacgttgccttttgaccagctacagcgcttc
tgggcgcatccggtccgtgcgttctttcagcagcggctgcgggttaattttcgtgaggaa
gagagcgaaattccggatgcagagcctttcaccctggagggattgacccgctaccagctt
aatcaacagttgctgaataccctggtcgaagaagaggatgcggataaaatgttccgccgc
tatcgtgcggcaggacagctaccttacggtgcgtttggtgaaattgtctgggacacgcag
cttcaggagatgcaaacgctggccgaccgcgttattgagcaccgacagcccagccagagt
agtgaaatcgatctgcaatgtggcggaattatcattaccggctggctacagcatgtgcag
cctgacggcctgctgcgctggcgtccttcactgctcagcgtttcacaagggatgcaactt
tggctggaacaccttgtctactgtgccagcggtgggacaggtgaaagtcggttgctggtg
cgcaaagagggtgagtggcgctttccgccgcttccggctgagcaggcgcgcgctttcctt
gacgacctggttgcaggctaccttaaaggaatgaccgaaccgctgctgctgctaccggaa
agtgggggcgcgtggataaaagcctgttacgacgcggcaaatgatgccattttaagagac
gacgagacgcagttaaaagcgcgcagtaagtttcttcaggcgtatgaagggaatatggtc
gtaagcggcgagggcgccgatatctggtatcagcgcctgtggcgcaccctggagccggag
tattacgaagcgattattgcgcaggccgagcgttacctgctgccgatatttcgctttaat
cagtcataa
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