Superficieibacter sp. HKU1: P0H77_20925
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Entry
P0H77_20925 CDS
T08896
Symbol
tssD
Name
(GenBank) type VI secretion system tube protein TssD
KO
K06887
uncharacterized protein
Organism
supe
Superficieibacter sp. HKU1
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
P0H77_20925 (tssD)
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GFIT
Motif
Pfam:
Col-Pyo_DNase
Pyocin_S
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
WES68035
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Position
complement(4386993..4388759)
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AA seq
588 aa
AA seq
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MSVLVYLRIVGEKQGDISSGCGTYESVGNRWQVGHEDEIFVFALSNRLTSTGKGVNLQGL
TFCKLIDKSSPLLCNAINQNERLFIEIYFYRINKTGHRERYYYIQLRNASLTAVHVSISH
NNLDTEYITVDYDYILCKHLIASTEFDWLAFPAGYNSLFIPPQSPPASNRKPEPLPVVNL
PPPAPQVTPVYAKSCLKEKGCTDAGTAEEPAENFGQVAIFAQPVVDDCCGYRHPHDAENA
SFPLVSGGPLATRGWGEWSLSGVLGVARYVPYIGALASALYIPSAGEGSARVPGRDEFWY
EEELRQKALAGSTATTRVRFFWGTDIHGRPQVYGVHTGEGTPYENVRVANMLWNEDTQRY
EFTPAHDVDGPLITWTPENPEHGNVPGHTGNDTPPLDQPTILVTPIPDGTDTWTTPPFPV
PDVKDFNDYILVFPAGSGIKPIYVYLKEDPRKLPGVVTGNGVPLSPGKYWLDMSVTNNGD
GAPIPAHIADKLRGREFKNFDKFREALWLEISKDPELMAQFKERNKDALNQTHAPYTSKE
GYYYGPKRIINKFQIHHRIAIENGGEVYNIDNLRIVTPRLHDEIHYRR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcttgtttatctgagaatagtcggcgagaagcagggtgatatttcttcaggg
tgtgggacatatgaatcggttggcaaccgctggcaggtcggccatgaagatgaaattttt
gtttttgcattaagcaatagacttaccagtaccggtaaaggtgttaatctccaggggctt
acgttttgcaagctcatcgataaaagctctccgctgctctgcaacgccataaaccagaat
gagcggttattcattgaaatttatttttatcggataaataaaaccggacaccgggaacgc
tattattatattcagctcaggaatgcttcattaaccgctgttcatgtaagcatttctcat
aataaccttgataccgaatatatcaccgtcgactatgactacatattatgtaaacatctg
atagccagtacggaatttgactggctggcttttcctgctggctacaatagcctgttcatt
ccccctcaaagcccacccgccagcaatcgtaaacctgaaccgctaccggttgttaacctg
ccaccccctgcgccacaggttaccccggtctacgccaaatcctgtctgaaggagaaaggg
tgcacggacgccggaacggcagaagaacccgctgaaaacttcgggcaggtggccattttt
gcccagccggtggttgatgattgctgcggatatcgtcatccacatgacgcagaaaacgcg
tcttttcctctggtatcaggcgggcctcttgctacccggggctggggcgaatggtcgctt
agtggcgtattaggggtggcaagatacgtaccgtatatcggcgcgctggcatctgccctg
tatattccctctgcaggcgagggcagcgcccgcgtccccggacgtgatgagttctggtat
gaggaagagctgcgccagaaagcgctggcaggcagtactgccaccacccgggtgcgtttt
ttctggggaaccgatattcacggcaggccgcaggtgtatggcgtgcacacgggggaaggt
acgccgtatgaaaacgtccgcgtggcgaacatgctgtggaacgaggacacgcagcgttac
gaattcacccccgcccatgatgtcgacggacccctaatcacctggacgccggaaaacccg
gaacatggcaatgttcccggccataccggtaacgacacacccccgctggatcagcccacc
attctggtgacgccgatcccggacggcacagatacctggaccacgccgccattcccggtt
cccgacgtaaaagattttaacgattatattctggtctttccggcgggctccggcattaag
ccgatctatgtttacctgaaagaagatccgcgaaagctgcccggcgttgtgacaggaaat
ggcgtcccgctttcaccagggaaatactggctggatatgtcagtgaccaataacggcgac
ggcgcacccatcccggcgcatatcgctgataaattacgcgggcgggagtttaaaaatttt
gataaattccgggaggcgctgtggctggagataagcaaggatccggagttgatggcgcag
tttaaagaaagaaataaagatgctctcaatcaaactcatgcaccttatacttctaaggaa
ggctattattatggtccaaaaagaataattaataaatttcagatacaccaccggattgcg
attgagaatggcggagaagtttacaatattgataatttgagaatcgttacgcctcgacta
catgacgagattcactacaggagataa
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