Superficieibacter sp. HKU1: P0H77_21680
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Entry
P0H77_21680 CDS
T08896
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe00071
Fatty acid degradation
supe00280
Valine, leucine and isoleucine degradation
supe00310
Lysine degradation
supe00362
Benzoate degradation
supe00380
Tryptophan metabolism
supe00410
beta-Alanine metabolism
supe00640
Propanoate metabolism
supe00650
Butanoate metabolism
supe00907
Pinene, camphor and geraniol degradation
supe00930
Caprolactam degradation
supe01100
Metabolic pathways
supe01110
Biosynthesis of secondary metabolites
supe01120
Microbial metabolism in diverse environments
supe01200
Carbon metabolism
supe01212
Fatty acid metabolism
Module
supe_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
P0H77_21680 (fadB)
00650 Butanoate metabolism
P0H77_21680 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
P0H77_21680 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
P0H77_21680 (fadB)
00310 Lysine degradation
P0H77_21680 (fadB)
00380 Tryptophan metabolism
P0H77_21680 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
P0H77_21680 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
P0H77_21680 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
P0H77_21680 (fadB)
00930 Caprolactam degradation
P0H77_21680 (fadB)
Enzymes [BR:
supe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
P0H77_21680 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
P0H77_21680 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
P0H77_21680 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
P0H77_21680 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
GpA_nuclease
Motif
Other DBs
NCBI-ProteinID:
WES68164
LinkDB
All DBs
Position
4550107..4552296
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGKALDVLEQQKDLKGLLLSSN
KAAFIVGADITEFLSLFLVPQEQLSQWLRFANSVFCRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVSADQALK
LGLVDGVVKTEKLREGAIAILRQAINGDLDWKAKRQPKLEPLHLSKIEATMSFTIAKGMV
MQTAGKHYPAPITAVKTIEAASRHGRDEALELENQSFVPLAHSTEARALVGIFLNDQYVK
GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINEKSLTLGMNEAGKLL
NKQLERGKINGLKLAGIISTIQPTLNYADFERADVIVEAVVENPKVKKAVLAETEEKVLP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDQTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRYGQKNGLGFWRYKEDSKGKP
KKEEDDAVDSLLVDVSKAKHDFSDDEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGSLYAVPEGLQQKARQNEPYYPPVEPA
RPVGELKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtaccttgactggctggaagacggcatcgctgaactg
gtattcgatgcgcccggctcggtaaacaaactcgacactgcgaccgttgccagccttggc
aaggcgctggacgtgctggagcaacaaaaagatttaaaagggctgctgctcagttcaaat
aaagcggcttttatcgtgggtgctgatatcaccgaatttctctcgctgttcctcgtcccg
caggagcagttaagccagtggctacgttttgcgaacagcgtcttttgccgtctggaagat
ctcccggttcccaccctttccgccgtcaacggttatgcattaggcggcggctgcgaatgt
gtgctggcaaccgattatcgcctcgccacgccagatctgcgcatcggcctgccggaaacc
aaactgggtatcatgccaggctttggtggttccgtacgtctgcctcgcctgctgggagcg
gatagcgcactggaaattatcgccgccggaaaagatgtcagcgccgatcaggcgcttaaa
ctcgggctggtcgacggcgtagtgaaaaccgaaaaactgcgtgagggcgccattgccatt
ctgcgtcaggcgatcaacggcgatctggactggaaagccaaacgccagccgaagctggag
ccgctgcatttaagtaaaattgaagccaccatgagcttcaccatcgccaaaggcatggtg
atgcagacggcagggaaacattatccggctcctatcaccgccgtaaaaacgatcgaagcg
gcttcccgccatggtcgggatgaagcgctggaactggagaaccaaagctttgtcccactg
gcccactccaccgaggcacgcgcgctggtcggcattttcctcaacgatcaatatgtgaaa
ggtaaagcgaaaaagctgaccaaagatgtcgagacgccgaagcaggcagccgtgctgggc
gcgggcatcatgggcggcggtatcgcatatcagtcggcctggaaaggcgtgccggtcatc
atgaaggatattaacgagaagtcgttgacccttgggatgaatgaagctggcaaactgctg
aacaagcagcttgagcgcggcaaaatcaacggcctgaagctggccgggattatttccact
atccagccaacgttaaattacgccgattttgaacgtgctgatgtcatcgtcgaagcggtg
gttgaaaatccaaaagtgaaaaaagcggtgctggcggaaacggaagagaaggttcttccg
gataccgtcctggcctctaacacctcgaccattccgattagcgaactggccagcgtactg
aagcgcccggaaaacttctgcggtatgcacttctttaacccggtgcaccggatgccgctg
gtcgaagtgattcgcggtgaaaaaacctctgaccagacgattgccaaagtggtcgcctgg
gccagcaaaatgggtaaaacaccgattgtggtcaacgactgccccggcttctttgttaac
cgcgtcctgttcccctacttcgccggattcagccagctgctgcgcgacggcgcggacttc
cgcaaggttgataaagtgatggagaaacagttcggctggccgatgggcccggcctatctg
ctggacgtggtcggcattgatactgcgcatcatgcccaggctgttatggccgcgggtttc
ccgcagcggatgcagaaagattaccgcgatgccatcgacgcgctgtttgacgctaatcgt
tacgggcagaaaaacggcctcggtttctggcgttataaagaagacagcaaaggtaaaccg
aagaaagaagaagatgacgccgtcgatagtctgctggtcgacgtcagcaaagcgaagcac
gattttagcgatgacgagattattgcccgcatgatgatcccgatggtcaacgaagtggtg
cgctgtctggaagaaggcatcattgccagcccggcggaagccgatatggcgctggtttac
ggtctcggcttcccgccgttccacggcggcgcattccgctggctggatacgcttggcagc
gcaaaataccttgatatggcccagcaatatcagcacctcggttcgctgtatgccgtgcct
gaaggtctgcaacagaaagcgcgccagaacgaaccgtactatcccccggttgagcctgcc
cgtccggttggcgagctgaaaacggcttaa
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