Superficieibacter sp. HKU1: P0H77_21845
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Entry
P0H77_21845 CDS
T08896
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe03420
Nucleotide excision repair
supe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P0H77_21845 (uvrD)
03430 Mismatch repair
P0H77_21845 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
supe03400
]
P0H77_21845 (uvrD)
Enzymes [BR:
supe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P0H77_21845 (uvrD)
DNA repair and recombination proteins [BR:
supe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P0H77_21845 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
P0H77_21845 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DUF6658
Motif
Other DBs
NCBI-ProteinID:
WES68193
LinkDB
All DBs
Position
complement(4583840..4586002)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAATRSNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGSDGEPISLYCAFNELDEARFVVNRIKTWQENGGALEHCAILYRSNAQS
RVLEEALLQIGMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQASRERQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRIMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPVNHQRMG
TPVSENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgatagccttaatgacaaacagcgcgatgccgtagcggcg
acgcgcagcaacatgctggtgctggcgggcgcgggaagcggtaagacgcgtgtgctggtg
caccgcatcgcctggctgttgagcgtcgaaaattgctcgccctattccattatggccgtg
acctttaccaataaagcggcggctgagatgcgccaccgtattggtcaactgatgggcacc
agccagggcgggatgtgggtgggaacgtttcacgggctggcgcaccgcctgctgcgggcg
caccatctggatgccggattgccgcaggatttccagatcctcgacagcgaagaccagctg
cgtctgcttaagcgtcttatcaaagcgatgaatctggatgagaagcagtggccgccgcgc
caggccatgtggtatatcaacggccagaaagacgaagggctgcggccgcaccatatccag
agctacggcaatccagtcgaacagacctggcagaaggtctatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggacttcgccgaactgctgctgcgcgcccacgagctgtgg
ctcaataagccgcacattcttcagcactaccgcgagcgttttaccaatatcctggtggat
gaattccaggataccaacaacattcagtacgcgtggatccgcctgctggcgggcgacacc
ggcaaggtgatgatcgtcggcgacgacgaccagtcgatctacggctggcgtggcgcgcag
gtagaaaatatccagcgcttccttaacgatttccccggcgcgcagactattcgtctggag
caaaactaccgttctaccagcaacattctcagtgcagctaacgccctgatcgaaaacaac
aacggtcggctgggcaaaaaactatggaccgacggtagtgacggcgagccgatttcactt
tactgcgcctttaacgagctggatgaagcgcgctttgtagtgaatcgcatcaaaacctgg
caggaaaacggcggcgcgctggagcactgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcattattgcagattggcatgccgtaccggatttacggcggtatg
cgattcttcgagcgtcaggaaatcaaagacgcgctctcttacctgcgcctgattgctaac
cgtaacgacgatgcggcattcgagcgtgtggttaacacgccgacgcgtgggattggtgac
cgcacgctggacgtggtgcgccaggcgtcacgcgagcgtcagcttacgctatggcaggct
tgtcgcgaactgcttcaggaaaaggcgctggcagggcgtgccgccagcgcattacagcgc
tttatggaactgatcgacgcgctggcgcaggaaaccgccgatatgccgcttcacgtccag
actgaccgggtaatcaaagactccggcctgcggataatgtacgaacaggagaaaggcgaa
aagggccagacgcgtatcgaaaacttagaggaactggtaacggcaacgcgccagttcagc
tacaacgacgaagacgaagatctgatgccgctgcaggcgttcctttcccacgccgcgctg
gaagcaggcgaagggcaggcggatacctggcaggatgccgtccagctgatgaccctgcac
tccgccaaaggactggagttcccgcaggtatttatcgtcggcgtggaagaaggcatgttc
cccagccagatgtcgctggacgaaggcgggcgtctggaagaggaacgtcgtctggcttac
gtcggcgttacgcgtgctatgcagaaactgacgctcacatacgccgaaacgcgccgtttg
tacggtaaagaggtataccatcgcccgtcgcgcttcatcggcgagctgcctgaagagtgt
gtggaagaagtacgcctgcgcgccagcatcagccgcccggtcaaccatcagcgaatgggc
acgcctgtttccgaaaacgataccggctacaagctgggccagcgcgtgcgccatgcaaaa
ttcggcgaagggacgattgtgaacctcgaaggcagcggcgagcacagccgtttgcaggtc
gcgttccaggggcaggggatcaaatggctggttgcagcctatgcgaaactggaaacggtc
taa
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