Staphylococcus aureus subsp. aureus TCH60: HMPREF0772_11724
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Entry
HMPREF0772_11724 CDS
T01889
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
suq
Staphylococcus aureus subsp. aureus TCH60
Pathway
suq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0772_11724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suq03019
]
HMPREF0772_11724
03400 DNA repair and recombination proteins [BR:
suq03400
]
HMPREF0772_11724
Enzymes [BR:
suq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0772_11724
Messenger RNA biogenesis [BR:
suq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF0772_11724
DNA repair and recombination proteins [BR:
suq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0772_11724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ADQ77186
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All DBs
Position
1799568..1800947
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AA seq
459 aa
AA seq
DB search
MLHDILRNKFGFENFKPGQQEIIESIMSQQHTLGILPTGSGKSLCYQIPTYLSGKPTLII
SPLISLMDDQVMQLKINGEKRVTCIHSGMDEIEKKHNIKCLRHSRFIFLSPEFLLQPSNF
KLISMIDFGMIVLDEAHCLSEWGYDFRPHYALIGKVTKHFKEAVVLALTATAPPHLQDDL
TEMLEIQFNVIKTTMNRPNISFKHLNFHDDEDKIEWLLPFLQQSGPTIIYVSSKKMCLNL
AQLIYDSGFLTGIYHGDMNYQERHTVQQQFLNNDIPIIVATSAFGMGINKKDIRTIIHFH
LSTSPSNYIQEIGRAGRDGELSQAISLFQPDDKYILETLLFADMITEEDVQNFEIGEFLA
PDKQDVLTTLHSFYSIGALKQVFKKSFKRKQLGFFRMIGYCKLDQCRRKYLLEFFGEYPP
AQDRCCDNDSNITDIAILNKKKVIRSIGFDEKLQNLFLR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatgatattttacgaaacaaatttggcttcgagaattttaaaccgggacaacag
gaaattatagaaagtataatgtctcaacaacacactctaggtattcttccaactggaagt
ggaaagagtttgtgttatcaaatacctacgtatttatcaggtaagccgacattaattatc
tcaccgttaatatctttaatggatgaccaagttatgcagttgaaaataaatggagaaaaa
cgtgtaacatgtattcactctggtatggatgaaattgagaaaaagcataatattaaatgt
ttacgacatagccgcttcatctttctaagtccagaatttctcctgcagccgtcaaatttt
aaattaatatctatgatagactttggcatgattgttctagatgaagcacattgtctatct
gaatggggatatgatttcagaccacattatgctctaattggaaaagtaacaaagcatttt
aaagaagcggttgtcttagcattgacagcaactgcaccaccgcatttgcaagatgatttg
acggaaatgctagagattcaattcaacgttattaaaactacaatgaatcgcccaaacata
agctttaagcatcttaattttcatgatgatgaagataaaattgagtggttgctgccgttt
ctacaacagtcgggaccaacgattatttatgtctcatcgaaaaagatgtgtctgaattta
gcgcaacttatttatgattcaggttttcttactggcatttatcatggtgatatgaattat
caagagcgacacacagttcaacaacaatttttaaataatgatattccgattatagtcgca
acgagtgcttttggtatgggaattaataaaaaagatattcgcacaatcattcactttcat
ctttcaacaagtccttctaactacattcaagaaattggacgtgcgggtcgcgatggtgaa
ctaagtcaggcaattagtttatttcaaccggacgataaatatattttagaaacgttatta
tttgcagatatgataacagaagaagatgtacaaaatttcgaaataggagaatttttagca
cccgataaacaagacgttttgacaacgttgcattcattctatagtatcggcgccttgaaa
caggtatttaagaaatcatttaaacgaaagcaattaggattctttcgtatgattggctat
tgcaaattggatcaatgtagacggaagtatttattagaatttttcggtgaatatccaccg
gcacaagatcgatgttgtgacaatgattctaatataactgatatcgcaattttaaataag
aagaaggtaattagaagtattggatttgatgaaaagttgcaaaatttatttctcagatag
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