Staphylococcus aureus subsp. aureus TCH60: HMPREF0772_11980
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Entry
HMPREF0772_11980 CDS
T01889
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
suq
Staphylococcus aureus subsp. aureus TCH60
Brite
KEGG Orthology (KO) [BR:
suq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suq03032
]
HMPREF0772_11980 (topA)
03400 DNA repair and recombination proteins [BR:
suq03400
]
HMPREF0772_11980 (topA)
Enzymes [BR:
suq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HMPREF0772_11980 (topA)
DNA replication proteins [BR:
suq03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0772_11980 (topA)
DNA repair and recombination proteins [BR:
suq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0772_11980 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Zn_ribbon_RPB9
Auto_anti-p27
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
ADQ77442
LinkDB
All DBs
Position
complement(2089436..2091511)
Genome browser
AA seq
691 aa
AA seq
DB search
MTLADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDTEDNYEPKYITIR
GKGPVVKELKKHAKKAKNVFLASDPDREGEAIAWHLSKILELEDSKENRVVFNEITKDAV
KESFKNPREIEMNLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDR
ENEIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPFKLKTKKDVEKITAALDGDQFEI
TNVTKKEKTRNPANPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKKQGTIGLITY
MRTDSTRISDTAKAEAKQYITDKYGESYTSKRKASGKQGDQDAHEAIRPSSTMRTPDDMK
SFLTKDQYRLYKLIWERFVASQMAPAILDTVSLDITQGDIKFRANGQTIKFKGFMTLYVE
TKDDSDSEKENKLPKLEQGDKVTATQIEPAQHYTQPPPRYTEARLVKTLEELKIGRPSTY
APTIDTIQKRNYVKLESKRFVPTELGEIVHEQVKEYFPEIIDVEFTVNMETLLDKIAEGD
ITWRKVIDGFFSSFKQDVERAEEEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACS
NFPDCRNTKAIVKSIGVKCPKCNDGDVVERKSKKNRVFYGCSKYPECDFISWDKPIGRDC
PKCNQYLVENKKGKTTQVICSNCDYKEAAQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgacattggcagataatttagtcattgttgaatcgcctgcaaaagcaaaaaccattgaa
aagtatttaggtaagaaatataaagttatagcttcaatgggacacgtcagagacttacca
agaagtcaaatgggtgtcgacactgaagataattacgaaccaaaatatataacaatacgc
ggaaaaggtcctgttgtaaaagaattgaaaaaacatgcaaaaaaagcgaaaaacgtcttt
ctcgcaagtgaccccgaccgtgaaggtgaagcaattgcttggcatttatcaaaaatttta
gagcttgaagattctaaagaaaatcgcgttgttttcaacgaaataactaaagacgctgtt
aaagaaagttttaaaaatcctagagaaattgaaatgaacttagtcgatgcacaacaagcg
cgtcgaatattagatagattagttggctataacatctcgccagttctatggaaaaaagta
aaaaaagggttgtcagcgggtcgagttcaatctgttgcacttcgtttagtcattgaccgt
gaaaatgaaatacgaaactttaaaccagaagaatattggactattgaaggagaatttaga
tacaaaaaatcaaaattcaatgctaaattccttcattataaaaataaaccttttaaatta
aaaacgaaaaaagatgttgagaaaattacagctgcattagatggagatcaattcgaaatt
acaaacgtgactaaaaaagaaaaaacgcgtaatccagcaaacccatttacaacttctaca
ttacaacaagaggcggcacgtaaattaaactttaaagctagaaaaacaatgatggtcgca
caacaattatatgaaggtatagatttgaaaaaacaaggtacgattggtttaataacatat
atgagaaccgattctacacgtatttcagatactgccaaagctgaagcaaaacagtatata
actgataaatacggtgaatcttacacttctaaacgtaaagcatcagggaaacaaggtgac
caagatgcccatgaggctattagaccttcaagtactatgcgtacgccagatgatatgaag
tcatttttaacgaaagaccaatatcgattatacaaattaatttgggaacgatttgttgct
agtcaaatggctccagcaatacttgatacagtctcattagacataacacaaggtgacatt
aaatttagagcgaatggtcaaacaatcaagtttaaaggatttatgacactttatgtagaa
actaaagatgatagtgatagcgaaaaggaaaataaactgcctaaattagagcaaggtgat
aaagtcacagcaactcaaattgaaccagctcaacactatacacaaccacctccaagatat
actgaggcgagattagtaaaaacactagaagaattgaaaattgggcgaccatcaacttat
gccccgacaatagatacgattcaaaagcgtaactatgtcaaattagaaagtaagcgtttt
gttcctactgagttgggagaaatagttcatgaacaagtgaaagaatacttcccagagatt
attgatgtggaattcacagtgaatatggaaacgttacttgataagattgcagaaggcgac
attacatggagaaaagtaatcgacggtttctttagtagctttaaacaagatgttgaacgt
gctgaagaagagatggaaaagattgaaatcaaagatgagccagccggtgaagactgtgaa
gtttgtggttctcctatggttataaaaatggggcgctatggtaagtttatggcttgctca
aacttcccggattgtcgtaatacaaaagcgatagttaagtctattggtgttaaatgtcca
aaatgtaatgatggtgacgtcgtagaaagaaaatctaaaaagaatcgtgtcttttatgga
tgttcgaaatatcctgaatgcgactttatctcttgggataagccgattggaagagattgt
ccaaaatgtaaccaatatcttgttgaaaataaaaaaggcaagacaacacaagtaatatgt
tcaaattgcgattataaagaggcagcgcagaaataa
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