Staphylococcus aureus subsp. aureus TCH60: HMPREF0772_12423
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Entry
HMPREF0772_12423 CDS
T01889
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
suq
Staphylococcus aureus subsp. aureus TCH60
Pathway
suq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
suq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0772_12423 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suq03400
]
HMPREF0772_12423 (uvrB)
DNA repair and recombination proteins [BR:
suq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0772_12423 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0772_12423 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
P-loop_SecA
AAA
Sen15
Kinesin
HerA_C
AAA_22
AAA_25
AAA_7
TrwB_AAD_bind
UFL1
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
ADQ77885
LinkDB
All DBs
Position
complement(2534540..2536573)
Genome browser
AA seq
677 aa
AA seq
DB search
MSGNINNTLKEEAYVTMVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATG
TGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYV
PSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVR
VGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEID
RIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLE
AQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHV
TLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIE
HTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLT
TYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDA
DKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHG
ITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDF
EKATELRDMLFELKAEG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggaaatataaataatacgttgaaagaggaggcatatgtgactatggttgaacat
tatccttttaaaatacattctgattttgagcctcaaggtgaccaaccgcaagcaattaag
gaaatcgtggaaggtattaaagcggggaaaagacatcaaactttattaggtgcaactggc
acagggaaaacatttacgatgagtaatgttattaaagaagttgggaaaccaacgttaatt
atcgcgcataacaaaacattagcaggacaattatatagtgagtttaaagaattttttcct
gaaaacagggtggaatactttgtaagttactatgattattatcaacctgaggcatacgta
ccgtctactgacacttttattgaaaaagatgcctcaatcaatgatgaaattgatcaacta
cgacattctgctacaagtgcattatttgaacgcgatgatgtaattattattgctagtgta
agttgtatatatggtttaggtaatcctgaagaatataaagatttagtagtaagtgttcga
gttggtatggaaatggatagaagtgaattacttagaaaacttgtagatgtgcaatataca
cgaaatgacatcgatttccaacgaggaacgtttcgagtgcgtggtgatgttgttgaaata
ttcccagcctctaaagaagaactttgtataagggttgagtttttcggcgatgagattgac
cgtattcgagaagttaactacctaactggtgaagtgttgaaagaaagagaacattttgcg
atattcccagcttctcacttcgtaacacgtgaagaaaagttgaaagttgcgattgaacgt
attgaaaaagaattggaagaacgattgaaagaattacgagatgagaataaattactagaa
gcgcaaaggttagaacagcgtaccaactatgatttagaaatgatgcgagagatgggattc
tgttcaggaattgaaaactattccgtacatttaactttgcgaccactgggttcgacacca
tatactttattggattactttggcgatgattggttagtaatgattgatgaatcacatgtg
acattaccgcaagttcgaggcatgtataacggagacagagcgcgtaaacaagttttggtg
gatcatggatttagattaccgagtgcattagataaccgtcctcttaaatttgaagaattt
gaagaaaagacaaaacaacttgtgtatgtatctgcaacgcctggaccatacgaaattgaa
catacggataagatggttgaacaaattattcgtcctactggtttactggatcctaagatt
gaggttagacctactgaaaatcaaattgacgatttattaagtgaaattcaaacaagggtt
gagcgtaatgaacgcgtacttgttacaacgctcactaaaaagatgagtgaagatttaacc
acatacatgaaagaagcgggtattaaagttaattatctgcattcagaaatcaagacatta
gaacgaatcgaaataattagagacttacgaatgggtacatatgatgttatcgtaggtatt
aatttattaagagagggtattgatataccagaagtttctctagttgtcatattagatgca
gataaagaaggatttttacgttctaaccgctcattaattcaaacaataggtagagctgcg
cgtaacgataaaggtgaagtcattatgtatgccgataaaatgactgattcgatgaagtat
gcaattgatgagacacaacgtcgtcgagaaatacagatgaaacataatgaaaaacatggt
attacacctaaaacaattaataaaaaaatacatgatttaattagtgctactgttgaaaat
gacgaaaataatgacaaagcacaaactgtgatacctaagaagatgacgaaaaaagaacgt
caaaagacaatcgacaatatagaaaaagaaatgaaacaagcagcgaaagatttagatttc
gagaaagctacagaattaagagatatgttatttgaattaaaagcagaagggtga
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