Staphylococcus aureus subsp. aureus TCH60: HMPREF0772_12466
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Entry
HMPREF0772_12466 CDS
T01889
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
suq
Staphylococcus aureus subsp. aureus TCH60
Pathway
suq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0772_12466 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suq03019
]
HMPREF0772_12466 (recQ)
03400 DNA repair and recombination proteins [BR:
suq03400
]
HMPREF0772_12466 (recQ)
Enzymes [BR:
suq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0772_12466 (recQ)
Messenger RNA biogenesis [BR:
suq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF0772_12466 (recQ)
DNA repair and recombination proteins [BR:
suq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0772_12466 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
GH123_cat
DUF1033
Motif
Other DBs
NCBI-ProteinID:
ADQ77928
LinkDB
All DBs
Position
complement(2577192..2578973)
Genome browser
AA seq
593 aa
AA seq
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MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLLLGGTTIVI
SPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSNGEIQFLYVAPERFENRYF
LNMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQ
DIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFILDYIKTHDEDAGIIYCSTRKQVE
ELQEALESQKIESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIH
YNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLT
KMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQ
QESYSVIIQVLRGESTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEI
LMCDTSIKKLLSNEVEVFTTPFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIA
PVSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaaacattatcgcattactttgggtatgaaacgtttcgaccaggacaagaa
gaaattattagcaaagtattagaccatcgtaatgtgcttggtgtcttaccaactggtgga
ggtaagtctatatgctatcaagtaccaggtttattgttaggtggtacaacaattgtaata
agtccactaatatcattaatgaaagatcaagtggatcaattaaaagcgatgggaattcaa
gctgcttttttaaatagtagtttgactcaaaaagagcaacaacgtattgaaaaagcatta
tcaaatggagaaattcaatttttgtatgttgcaccagaacgatttgaaaaccgatatttt
ttaaatatgcttcagcgtataaagattcatttagtcgcgtttgatgaagcgcattgtata
tctaaatggggacatgattttagaccgagttatcaaaacgttatttctaaagtatttacg
ttacctcaagattttacaataatagcgttgacagcaactgccacggttgaagtacagcaa
gatattagagaaaagttaaatatcgctcaaactgatcaaattaaaacgagtactaagcgt
agaaacttaatttttaaagtaaatcctacttatcaacgtcaaaaatttatattggattat
attaaaacacacgatgaagatgcaggcattatttattgttctacacgtaagcaagttgaa
gagcttcaagaagccttagaaagccagaaaattgaaagtgttatatatcatgcaggtttg
agcaataaagaaagagaagaagcgcagaatgatttcttatttgatcgtgttaaagtagtc
gttgctacaaatgcttttggcatgggtattgataaatccaatgtacgttttgttattcat
tataatatgcctggagatttagaatcttattatcaagaagcgggtcgtgcaggtcgtgat
gggttgaaaagtgaatgtattttgttatttagtgaacgcgatatcaatttacacgagtat
tttataacagtctctcaagctgatgatgactataaagataaaatgggcgaaaagttaact
aaaatgattcaatatacaaaaacaaaaaaatgtttagaagcaacaattgtccattatttt
gaaccgaatgaaaaattagaagaatgtgaacaatgtagtaattgtgttcaacaagataaa
tcatataatatgacacaagaagctaagatgattattagttgcatcgctcgtatgaaacaa
caagagagttatagtgttatcattcaagtgctaagaggagagtcaacagattatattaag
tataaaggttatgatcaaatttcaacccatggtttaatgaaaggctacacaacatcagaa
ttaagtcacttaatagatgaattaagattcaaagggttcttaaatgaaaatgatgaaata
ttaatgtgtgatacttcaattaaaaaattactcagtaatgaagtagaagtattcacaaca
ccatttaagcaaaaagcgactgaaaaagtatttataaatacggttgaaggggttgaccga
gtattattcagtcaattggtagaagttcgtaaaaagttaagtgacaaattaacgatagca
cctgtaagtatattttctgattacacgttggaggaatttgctaaacgtaagcctgcttcg
aaacaagatatgattaatattgatggcgtaggtagttataaattaaaacattattgtcca
gcatttttagaaacgattcaaaattataaagccaaagtataa
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