Stigmatella aurantiaca: STAUR_1622
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Entry
STAUR_1622 CDS
T01425
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sur
Stigmatella aurantiaca
Pathway
sur00550
Peptidoglycan biosynthesis
sur01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STAUR_1622 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sur01002
]
STAUR_1622 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sur01011
]
STAUR_1622 (dacB)
Enzymes [BR:
sur01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
STAUR_1622 (dacB)
Peptidases and inhibitors [BR:
sur01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
STAUR_1622 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sur01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
STAUR_1622 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
HEAT_2
Motif
Other DBs
NCBI-ProteinID:
ADO69426
UniProt:
Q08U59
LinkDB
All DBs
Position
1984879..1987116
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AA seq
745 aa
AA seq
DB search
MQVHRAKSILAAAAVFILALPSAYAASPADKRAEREALKAALLDVIQTTPLKTSRVGIHM
VSVDDGSVVFSQNADELLNPASNVKLVTAAAALVTLGPEFRFDTEFIIEADLPADGKVKT
LFVRGKGDPSMTTERLYASVSELFHTGLREVQDIVIDDSWFDPERTPPGYDQEDSDRAYM
APTGAVSLNWNAAAIYLRPGGAPGAKGTVEMEPPSDYFVVENNLTTGSSRARRVSVTSKP
GGEKQKILVRGQLPDNEGSLSVWKKIDNPPMYFGYTLKQLLISRGIKVKGRVKQGLAPSR
AKLLHVAQSETFDIILKRLNKLSSNFVAEMLLKAMGAERGGAPGTFQKGVAVVEAFLERD
VGIPSGTYVMKNGSGLNDANRFSAAHLNRILRHMYERFPLSPEYLSSLGIAGKDGTLKYR
FEGSEAVGRLRAKTGTLENVSALSGYVQAAGGEKFIFAMMVNDYSGRSGPVVRGLDALGA
AVAASGSVMGPSRAVAAISDSTRPAADGGEVASRIKTYLELGKQRDQRNISFLRTAWRSE
KDPAVRAVLAEGLYQSNPNDYLGARTLLDSYSAGADVYGRLRMVAKALSMEVPGVTSMVE
LAAGGNAEALVRVVELAAASRGDVTAEAELALALGEVARTAPEELVVALREAGGSERDTS
VSLLARGLVQSGEAEHPFWKSLRKQLGATDPTLAAFARSLDATLSQKVAEAKAPPGPIVL
PNVVPGSVIPGGSAPAQTAESRPGG
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggttcatcgagccaaatccatcttggccgcggcggccgtattcattctggcgctt
ccttcggcctatgcggcgtccccggcggacaaacgggcggagcgtgaggcgctaaaagcg
gccttgctcgacgtcattcaaacgacgcccttgaagaccagccgcgtgggcatccacatg
gtgagtgtggacgacggctcggtggtgttcagccagaacgcggacgagctgctcaacccg
gcctccaacgtgaagctcgtcaccgccgcggcggcgctggtgacgttggggcccgagttc
cggttcgacaccgagttcatcatcgaggcggatctgccggccgacggcaaggtcaagacg
ctcttcgtgcgcggcaagggcgatccgtccatgacgaccgagcgcctgtacgccagcgtc
tcggagctgttccacaccggcctgcgcgaggtgcaggacatcgtcatcgatgactcctgg
ttcgaccccgagcgcaccccgcccgggtatgaccaggaggactcggaccgggcgtacatg
gcgcccacgggcgcggtgagcctcaactggaacgcggcggccatctacctgcgccccggg
ggcgcgcccggcgccaagggcacggtggagatggagcctccgagcgactacttcgtggtg
gagaacaacctgacgacgggcagcagccgggcccgccgggtctccgtcaccagcaagccc
ggcggggagaagcagaagatcctcgtgcgcggccagctgccggacaacgagggcagcctg
agtgtctggaagaagatcgacaacccgccgatgtacttcggctacacgctcaagcagctg
ctgatctcccggggcatcaaggtcaagggccgggtgaagcaaggcctggcgccctcgcgg
gcgaagctgctgcacgtggcccagtcggagacgttcgacatcatcctcaagcggctcaac
aagctctccagcaacttcgtggcggagatgctgctcaaggcgatgggcgcggagcggggc
ggggccccgggcaccttccagaagggcgtcgcggtggtggaggcgttcctcgagcgcgac
gtggggattcccagcggcacctacgtgatgaagaacggcagcggcctgaacgacgccaac
cggttctccgccgcgcacctcaatcgcatcctgcgccacatgtacgagcgcttcccgctg
tcccccgagtacctgtcctcgctgggaatcgccggcaaggacggcacgctgaagtaccgc
ttcgagggcagcgaggcggtgggccggttgcgcgcgaagacgggcacgctggagaacgtg
tccgcgctgagcggctacgtgcaggccgcgggtggcgagaagttcattttcgcgatgatg
gtgaatgactactccggccgctcgggcccggtggtgcgggggctggatgcgctgggggcg
gcggtggccgccagcggctcggtgatggggccttcccgcgcggtggcggccatctcggac
agcacccgtccggcggccgatgggggggaggtggccagccgcatcaagacgtacctggag
cttggcaagcagcgggatcagcgcaacatcagcttcctgcgcacggcgtggcgcagcgag
aaggatcccgcggtgcgcgcggtgctggccgagggcctctaccagtccaacccgaatgac
tacctgggcgcccggaccttgctcgacagctactcggcgggggcggacgtctatggacgg
ctgcgcatggtggccaaggccctgtcgatggaagtccccggggtgacgagcatggtggag
ctggctgcgggcggcaacgccgaggcgctcgtgcgcgtggtggagctggcggcggcctcc
cggggcgacgtgacggccgaggcggagctggccctggcgctgggcgaggtggcccgcacc
gcgccagaagagctggtggtggccctgcgcgaggcgggagggtcggagcgggacacgtcc
gtctcgttgctggcgcgtggcctggtgcagtcgggcgaggcggagcaccccttctggaag
tcgctgcgcaagcagctgggggccacggacccgacactggccgcgttcgcccggagcctg
gatgcgacgctgtcgcagaaggtggccgaagcgaaggcgcccccagggcccatcgtcctt
cccaacgtggtgcctggctcggtcatccccggtggcagcgcgcccgcccagaccgccgag
tcgcgtccaggcgggtag
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