Stigmatella aurantiaca: STAUR_1698
Help
Entry
STAUR_1698 CDS
T01425
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03420
Nucleotide excision repair
sur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STAUR_1698 (pcrA)
03430 Mismatch repair
STAUR_1698 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_1698 (pcrA)
Enzymes [BR:
sur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STAUR_1698 (pcrA)
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STAUR_1698 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
STAUR_1698 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADO69502
UniProt:
Q096D0
LinkDB
All DBs
Position
2092015..2094414
Genome browser
AA seq
799 aa
AA seq
DB search
MTVDGFVELVVRVLGATRRPNPEQHACLACNPAVPLLIAAGPGSGKTAVLILRALRHVLV
DRVLPERIMITTFTRKAAKEIRTRLIEWGTPLLEALLADRAGPLDADYRAFLRQVDINRF
VTGTLDSLCEEALSGARGPGERLPVLVEAFAANQLLARRGEIYKTAERLGQPFLDYLGLY
TNTGDPPETLGDMTRVVRMLVDRLVQDEVDLAEYVKPGPHQAARQAVHDIFKRYTESLRS
SHQMDFPTLERVFLERLRADRVPDLVSHLGVLLVDEYQDTNPLQEHIYLELARRTGAALT
VVGDDDQSLYRFRGATIELFRDFQARVANALGGPAPRLLYLTDNYRSTPEIVSFLNGFIQ
NDPDFASARIQPPKPMIRANQPSGGVPVLGMFRNNAEERAVDLADFLNQVFRQGGRPADA
RLAEPIRPSPHGGDLGDAVFLSHTVSEFRRGFRGTPPSERLPWLLRQNLEKQGILCFNPR
GRALKDIPEVGRALGLVLECLDAAEPGNEQGRIVADTPLTHAARSVFLRWRQDARALLAT
LPPAVIPRGESLQEVVARWQRFARHGQGVGTEWPLLDVLYNLLPWMPAFQDDPEHQVYLE
AVSRAAAQATAFSRHRSLIFREEPHRTRSIRAVIQDVLAPIADDLVEVDEDIMPSVPRGR
LNLMTIHQAKGLEFPLVIVDIASDFLSNHPKQRFRRFPDEPSPVTRLEDDLASCTPIGPL
RTARTAIQRSFEDLIRLYYVAYSRPQSVLLLVGCLPCLRYNTTIPHVATFWRRDGTWPWR
KPLSGQRPSMADHLPITLL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtcgacggttttgttgagctggtggttcgtgtcctcggggccacccggcgcccc
aatcctgagcagcacgcatgtttggcctgcaatccggcggtcccgttgctgatcgccgcg
ggtccggggtccggtaaaaccgcggtgctgatcctacgagcgctccggcacgtgttggtc
gaccgtgttttgcctgagcggatcatgataacgaccttcacgcgcaaggcggcgaaggag
atccgcacgcggctcatcgagtggggcacgccgctgctcgaagcgctcctcgcggaccgg
gcaggaccgctggacgcggactaccgcgccttcttgcgacaggtcgacatcaaccggttt
gtgaccggtaccctcgacagcctgtgcgaagaggccctctcgggcgcacgagggcccggc
gaacggctgccggtcttggtggaggcatttgccgcgaaccagctgctggcccgccgcggc
gagatctacaagaccgcggagcgcctgggacagccattcctggattacctggggctctat
accaacacgggcgacccgccggaaacgctcggcgacatgacgcgggtggtgcgcatgctc
gtggaccgcctcgtccaggacgaggtggatctcgcggagtacgtgaagcccggcccgcat
caggctgcccggcaggcggtccatgacatcttcaagcgctacacggagtcgctccgctca
agccatcagatggacttccccacgttggagcgcgtgttcctggagcggctgcgcgcggac
cgggttcccgacctggtgtcccacctcggtgttctgctcgtggacgagtatcaagacacc
aacccgctccaggagcacatctacctggagcttgctcgccggactggggcggcgctgacc
gtcgttggggacgacgaccagtcgctgtaccggtttcgcggtgccacgattgagctcttc
cgggacttccaagcgcgggtcgccaacgcactcggcggtccggccccccgtcttctttac
ctgactgacaactaccgctcgacccccgagatcgtctcgttcctcaatggcttcatccag
aacgatcccgatttcgcttcggcacgcatccagccccccaagccgatgatccgggcgaac
cagccctcgggcggtgtgccggtgctggggatgttccggaacaatgcggaggaacgcgcg
gtcgatctggcggatttcctgaatcaggtgttccggcaaggagggcgcccggccgatgcc
cggttggcggagccgatccggccctcaccccatgggggcgatctcggggatgccgtgttc
ttgtcgcatacggtgagtgagttccggcgcggtttcaggggaaccccgccgtccgagcgt
ctgccctggctgctgcggcagaacctcgagaagcaggggatattgtgtttcaacccacgt
ggccgcgccctgaaagacattcctgaagtggggcgcgcgttggggctcgtgctcgagtgt
ctcgacgcggccgaaccgggcaatgagcaaggccgcatcgtcgccgacacaccgctgacc
catgcggcgcggagcgtgttcctccgctggcgccaggacgcccgagcgctcttggcaacc
ctcccgccggcggtcattccgcgaggggaaagccttcaagaggtggtggcgcgttggcag
cgcttcgcccgtcatgggcagggggttgggaccgagtggcccctgctcgacgtgctctac
aacctgctgccgtggatgccggccttccaggatgatcccgagcatcaagtctacctggag
gcggtgtcacgtgcggccgctcaagcgacggccttctcacgccaccgctcgctgatcttt
cgcgaggagccccatcggactcgcagcatccgagcggtgattcaggacgtgctggccccg
attgccgacgacctggtcgaagtggatgaggacatcatgccgagcgttcctcgcggccgg
ctgaacctgatgaccatccaccaggccaaggggttggagttcccgctggtcatcgtcgat
atcgcgtcggacttcttgagcaaccaccccaagcagcgcttccggcggtttcccgatgaa
ccctcaccggtcacacgcttggaggacgatctcgcatcctgcaccccgatcgggccgctc
cggaccgcccggacggccatccagcgcagcttcgaggacctgatccggctctattacgtc
gcgtacagccgtccgcagagcgtgctcctgctcgtcggctgtctcccctgtcttcggtac
aacacgaccatcccgcacgtcgcgacgttctggcgccgggacggaacgtggccttggcgc
aagccgctctcggggcagcggccatcgatggcggaccatctcccgatcacccttctttag
DBGET
integrated database retrieval system
