Stigmatella aurantiaca: STAUR_2289
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Entry
STAUR_2289 CDS
T01425
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03420
Nucleotide excision repair
sur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STAUR_2289
03430 Mismatch repair
STAUR_2289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_2289
Enzymes [BR:
sur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STAUR_2289
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STAUR_2289
MMR (mismatch excision repair)
Other MMR factors
STAUR_2289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADO70093
UniProt:
E3FDL4
LinkDB
All DBs
Position
2812075..2814420
Genome browser
AA seq
781 aa
AA seq
DB search
MPSPGPALNTHEQALLEDLNPPQKEAVLHGEGPLLVLSGAGSGKTRVITRRVAHLVKVRR
VFPWRILAVTFTNKAAREMRERLVQLLGAQAHELVVSTFHSSAAMILRREAEAVGLTRSF
VIYDDGDQLNIVKRAMREARVEPSMQPREILHRIDQEKNAARLPDAMQVDADDLRGMVVK
RTYQTYQRLLRAANAVDFGDLLLLLVSLFRDHPEVLEKYRRRFSHVLVDEFQDTNPVQYE
LLRLLAPPPGANLVVVGDDDQSIYRWRGASVDNILGFPNTYPGAKVVKLEQNYRSDQAIL
EAAHAVISKNRRRMAKKLWSERQRGEHLQLLILRDERAEAQEVARQIHALQREGFIKYSG
MAVFYRVNAQSRVLEEALRLARVPYTLVSGRSFYDRAEVRDAAAYLRLMVNPRSDADLLR
IINTPARGIGDTTVERLTTHADHQGISLYEAIAQPEQIPALNSAAVRRLAGVHTLLASLN
SFAQGAKDAASAVDEMLRETRLVESLTAEGSDESLTRAENLREFLGAAQEFDLNRAAASV
AAAAAVPAEPEEPLPADLDAAPLSADVPPLQSFLEQISLVGDADAEVGEGKVALMTLHAA
KGLEFDAVFLTGMEDNVFPHSRALVGEDPDEGEEMAEERRLCYVGFTRARRRLFVSLAQC
RSLFGELRYNPPSRFLRDVPPTLFGIDPSVQEAPRPVAAPVAPRRRSYEDDDSPRIDRSY
SQAPDMEGASGDVRGMRVRHEQFGVGRIVSTDGSGPNAKVTVEFGGGVGLKRVIARFLLP
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtctcctggacccgccttgaatacccacgaacaagccctccttgaagatctcaac
cccccccagaaggaggcagtccttcatggggaaggccctctgctcgtcctctccggggca
ggcagcggcaagacccgcgtcatcacccgccgggtcgcgcacctggtcaaggttcgccgt
gtgttcccttggcggatcctcgccgtgaccttcaccaacaaggccgcccgggagatgcgc
gagcgcctcgtccaactcctgggcgcgcaggcccacgaactggtcgtcagcacgttccac
tcgtccgcggcgatgatccttcgccgggaggcggaggcggtggggctcacccgcagcttc
gtcatctacgacgacggcgaccagctcaacatcgtcaagcgcgccatgcgcgaggcccgc
gtggagcccagcatgcagccgcgcgagatcctccaccgcatcgaccaggagaagaacgcc
gcccgcctgcccgatgcgatgcaggtggatgcggatgacctgcgcggcatggtggtgaag
cggacttaccagacctaccagcggctgctgcgggccgcgaatgcggtggatttcggagat
ctgctgttgttgctcgtctcgctgttccgagaccacccggaggtgctggagaagtacagg
cggcgcttcagccacgtgttggtggacgagttccaggacaccaacccggtgcagtacgaa
ctgctgcgcctgctggccccgcctcctggtgccaacctggtggtggtgggagacgacgac
cagtccatctaccgttggcgaggggccagcgtggacaacatcctgggcttcccgaacacg
tacccaggggccaaggtggtgaagctggagcagaactaccgctccgatcaggccatcctc
gaggcggcgcacgcggtcatctccaagaaccggcgccgcatggcgaagaagctttggagc
gagcggcagcggggcgagcacctccaactcctcatccttcgcgacgagcgggccgaggcg
caggaggtggcccggcagatccatgccctgcaaagagagggtttcatcaagtactcgggc
atggctgtgttctaccgggtgaatgcccagagccgtgtgttggaagaggcgcttcggctg
gcgcgcgtgccgtacacgctggtcagtggccgcagcttctacgaccgggccgaggtgcgt
gacgcggcggcctacctgcgcctcatggtcaacccccgctcggatgctgacctgctgcgc
atcatcaatacccccgcgcgagggattggcgataccaccgtggaacggctcaccacgcac
gcggaccatcagggcattagcctctacgaggccattgcccagccggagcagatccccgcg
ctcaacagcgccgcggtgcgccggttggcgggtgtccatacgctgcttgcttcactgaac
agcttcgctcagggtgccaaggacgcggcgagcgccgtggacgaaatgctccgggaaacc
cggctggtggagtccctcaccgccgagggcagcgacgagtcccttacccgcgcggagaac
cttcgtgagtttctcggcgccgcgcaggagttcgatctgaaccgggcggctgcctccgtg
gcggccgctgctgcggtgcccgccgagcccgaagagcctcttccggccgacctggacgcg
gcccccctgtcggcggatgttcctccacttcagtccttcctggagcagatcagcctggtg
ggcgacgcggatgccgaggtgggggagggcaaggtggcgttgatgacgctgcatgccgcc
aagggcctggagttcgacgcggtgttccttacgggcatggaggacaacgtctttccccac
tcacgagcgctcgtgggggaagatccggatgaaggggaggagatggccgaggagcggcgc
ctctgttacgtggggttcacccgtgcgcgcaggcggctcttcgtgagcctcgcgcagtgc
cgatccctcttcggtgagctgcgctacaacccgccctcccgatttctgcgggacgtgcct
ccgacgctctttggcatcgacccgtccgtgcaggaggctcctcgcccggtggccgccccc
gtggcgcctcgccgccgttcctacgaggacgatgacagcccacgcatcgatcggtcctac
tcgcaggcgccggacatggaaggcgcgagcggggatgtccgcgggatgcgggtccgccac
gaacagtttggtgtggggcgcatcgtctctacggatggctcgggacccaacgccaaggtg
acggtggagttcggtggaggcgttggcctcaagcgcgtcattgctcgtttcctgctgccg
ggctag
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