Stigmatella aurantiaca: STAUR_2647
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Entry
STAUR_2647 CDS
T01425
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03030
DNA replication
sur03430
Mismatch repair
sur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STAUR_2647
03430 Mismatch repair
STAUR_2647
03440 Homologous recombination
STAUR_2647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sur03032
]
STAUR_2647
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_2647
Enzymes [BR:
sur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STAUR_2647
DNA replication proteins [BR:
sur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STAUR_2647
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STAUR_2647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
HTH_IclR
SpaO_N
Motif
Other DBs
NCBI-ProteinID:
ADO70451
UniProt:
Q08PT9
LinkDB
All DBs
Position
complement(3216971..3217630)
Genome browser
AA seq
219 aa
AA seq
DB search
MLPAHPDSDTTPVSPLPSLLFPSLPPHLRTLCFVDLETTGLDASRHEVLEVAVLRVDARS
LKVLAEYEARVQPTRLADAHPEALAVCGYSDEEWRDALSLEEVLATVTPLLAGTLVAGHN
TSFDWGFLVEGYRRTALTLPSVDYHRLDTASLAWPLLATGEVESLSLNALARHFGIHRPT
PHRAMADARCALEVARRLAVRMSRGGHMERLLEESGGVS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgctcaccctgattccgacaccacccctgtctcgcccctcccctcgctgctc
ttccccagcctcccgccgcacctgcggacgctctgcttcgtcgacctggagacgacgggc
ttggacgcctctcgtcacgaggtgctggaggtggccgtcctccgcgtcgacgcccgaagc
ctcaaggtgctggcggagtacgaggcgcgcgtgcagcccacccggctggctgacgcccac
cccgaagccctggccgtgtgcggctactccgacgaggagtggcgggacgccctgtccctg
gaggaagtcttggccaccgtgacgccgctcttggcgggcaccctcgtggccggccacaac
accagcttcgactggggcttcctcgtcgagggctaccgccgcaccgcgctgacgctgccc
tccgtcgactaccaccgcctcgacaccgccagcctcgcgtggccgctgctcgccacgggc
gaggtggagtctctctccctcaacgccctggccaggcacttcggcatccaccgccccacg
cctcaccgcgccatggcggacgcccgctgcgcgctggaggtggctcgccgcctcgccgtg
cgcatgagccgtggcgggcacatggagcggctgcttgaggagtcgggaggtgtctcgtga
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