Stigmatella aurantiaca: STAUR_3364
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Entry
STAUR_3364 CDS
T01425
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
sur
Stigmatella aurantiaca
Pathway
sur03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STAUR_3364 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_3364 (uvrB)
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STAUR_3364 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STAUR_3364 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
DUF87
Kinesin
KOW6_SPT5
AAA_22
UB2H
DUF8810
AAA_16
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ADO71156
UniProt:
Q08NL4
LinkDB
All DBs
Position
4067326..4069434
Genome browser
AA seq
702 aa
AA seq
DB search
MLNVQAMPDFQIVSAHAPQGDQPRAIAELTEGVLRGDRYQTLLGVTGSGKTFTMANLIAN
VQRPTLIIAHNKTLAAQLYGEFKEVFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSI
NDEIERMRHSATHSLRTRDDVVIVASVSCIYGLGAARSYVDMAATVTLGAELGRDAFMRK
LIESQYERSDFDFHRGTFRARGDTVEVFPAYEEERAVRVSFFGDEVEKITEFDPLRGVTL
GTLDKIVIFPASHYATEGDTRKKAVQTIRDELSERLQEFKRDGKLLEAQRIEQRTMFDLE
MIEQVGFCNGIENYSRHFSGRAPGEPPPCLIDYFPRNMLVLVDESHQTVSQIGAMYRGDR
SRKETLVNYGFRLPSALDNRPLKFTEFEEMVQQAVFVSATPAEYELQKSKGVVVEQIIRP
TGLTDPEVEVRPARNQVDDLLEEVRKRVAQKERVLATTLTKRMAEDLTEYFTDVGVKVRY
LHSDIGAIERTAIIRDLRKGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHVSL
IQTIGRAARNLHGHVIMYSDSITDSMKRAIEETRRRREVQRAYNQEHGITPRSVKSAILD
LSLQYDADPTALPLAADAANDVLDTKEIKRLIEEFTKDMQHAADEMQFEKAAQFRDRIVL
LKDMDLGLKPPSRSLLQSPPKAEDKTPMKGHRGHAAKGRRKR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgtccaggccatgccggacttccagatcgtcagtgcacacgcgccgcaaggc
gaccagccccgggccatcgccgagctgaccgagggtgtgttgcgcggagaccgctaccag
accctgctcggtgtcacgggctcgggcaagacgttcaccatggcgaacctcatcgccaac
gtgcagcggcccaccctcatcatcgcccacaacaagaccttggccgcccagctttacggt
gagttcaaggaagtcttcccgcacaacgccgtcgagtacttcgtctcgtactacgactac
taccagcccgaggcctacgtcccctcgtcggacaccttcatcgagaaggattcgtccatc
aacgacgagatcgaacgcatgcgccactcggccacccacagcctgcgcacccgcgacgat
gtggtcatcgtggccagcgtgtcctgcatctacggcctgggcgccgcgcgctcctatgtg
gacatggcggccacggtgaccttgggggcggagctgggccgcgacgcattcatgcgcaag
ctcatcgagagccagtacgagcgcagcgacttcgacttccaccggggcaccttccgcgcc
cggggcgataccgtggaggtttttcccgcctacgaggaggagcgcgccgtccgggtgagc
ttcttcggcgacgaggtggagaagatcaccgagttcgatcccctgcgtggcgtcaccctg
ggcacgctggacaagatcgtcatcttcccggcgagccactacgcgaccgagggcgacacc
cgcaagaaggccgtccagaccatccgcgacgagctgtccgagcggctccaggagttcaag
cgcgacggcaagctgctggaggcgcagcggatcgagcagcgcacgatgttcgatctggag
atgatcgagcaggtggggttctgcaacggcatcgagaattactcgcggcacttctcgggc
cgggcgccgggagagccgccgccgtgcctcatcgactatttcccccggaacatgctcgtg
ctcgtggacgagagccaccagaccgtttcgcagatcggcgccatgtaccggggcgaccgc
tcgcgcaaggagacgctggtgaactatggcttccggttgccgagcgccctggacaaccgg
cccctgaagttcaccgagttcgaggagatggtgcagcaggccgtcttcgtctccgccacg
ccggccgagtacgagcttcagaagagcaagggcgtggtggtcgagcagatcatccgcccc
acggggctgacagatcccgaggtggaggtgcgccccgcgcgcaaccaggtcgatgatctc
ctggaggaggtccgcaagcgcgtggcccagaaggagcgcgtgctggccacgacgctcacc
aagcgcatggcggaggacctcaccgagtacttcaccgacgtgggcgtcaaggtgcgctac
ctgcactcggacatcggcgccatcgagcgcaccgcgatcatccgggacctgcgcaagggg
gtgttcgacgtgctggtgggcatcaacctgctgcgagagggcctggacatccccgaggtg
tccctggtggccatcctcgatgcggacaaggagggcttcctgcgcagccacgtctcgctc
atccagaccatcgggcgcgcggcgcgcaacctccatggccacgtcatcatgtactcggat
tcgatcaccgactcgatgaagcgcgccatcgaggagacccgccggcggcgcgaggtgcag
cgcgcctacaaccaggagcacggcatcaccccccgctcggtcaagagcgccatcctcgat
ctgtcgctccagtacgatgcggaccccaccgccctgccgctggcggccgacgccgccaac
gatgtgctcgacacgaaggagatcaagcgcctcatcgaggagttcacgaaggacatgcag
cacgcggcggacgagatgcagttcgagaaggcggcgcagttccgcgaccgcatcgtgctg
ctcaaggacatggacctgggcctcaagccgcccagccgctcgctcttgcagtcccccccc
aaggccgaggacaagacgcccatgaagggccaccgtggccatgcggccaagggccgcaga
aagcgctag
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